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Association of genetic variants at CETP, AGER, and CYP4F2 locus with the risk of atrophic age-related macular degeneration.


ABSTRACT:

Background

Age-related macular degeneration (AMD) is the leading cause of blindness in the elderly individuals. The etiology of AMD includes environmental and genetic factors.

Methods

We aimed to determine the association between CETP (rs5882; rs708272; rs3764261; rs1800775; rs2303790), AGER (rs1800624; rs1800625), and CYP4F2 (rs1558139) gene polymorphisms and development of atrophic AMD. About 52 patients with atrophic AMD and 800 healthy control subjects were evaluated. The genotyping of single-nucleotide polymorphisms in CETP, AGER, and CYP4F2 was carried out using the real-time-PCR method.

Results

Genetic risk models in the analysis of CETP rs5882 revealed statistically significant variables with increased risk of atrophic AMD in the codominant (p < .001), dominant (p < .001), recessive (p < .001), and additive (p < .001) models with the highest 25.4-fold increased risk of atrophic AMD in the codominant model (p < .001). The AGER rs1800625 was associated with a highly increased risk of atrophic AMD in the codominant (p < .001), recessive (p < .001), and additive (p < .001) genetic models.

Conclusion

We identified two polymorphisms with a higher risk of atrophic AMD (CETP rs5882 and AGER rs1800625).

SUBMITTER: Liutkeviciene R 

PROVIDER: S-EPMC7507364 | biostudies-literature | 2020 Sep

REPOSITORIES: biostudies-literature

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Publications

Association of genetic variants at CETP, AGER, and CYP4F2 locus with the risk of atrophic age-related macular degeneration.

Liutkeviciene Rasa R   Vilkeviciute Alvita A   Kriauciuniene Loresa L   Banevicius Mantas M   Budiene Brigita B   Stanislovaitiene Daiva D   Zemaitiene Reda R   Deltuva Vytenis P VP  

Molecular genetics & genomic medicine 20200714 9


<h4>Background</h4>Age-related macular degeneration (AMD) is the leading cause of blindness in the elderly individuals. The etiology of AMD includes environmental and genetic factors.<h4>Methods</h4>We aimed to determine the association between CETP (rs5882; rs708272; rs3764261; rs1800775; rs2303790), AGER (rs1800624; rs1800625), and CYP4F2 (rs1558139) gene polymorphisms and development of atrophic AMD. About 52 patients with atrophic AMD and 800 healthy control subjects were evaluated. The geno  ...[more]

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