Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mitochondrial genome of Murina shuipuensis (Chiroptera: Vespertilionidae) from Shuifu Village, Guizhou, China (type locality).

ABSTRACT: Murina shuipuensis, a small-sized forest bat with distinct bright orange-yellow ventral fur, is only found from its type locality thus far. In this study, a complete mitochondrial genome of a male individual of M. shuipuensis from Shuifu Village, Libo, Guizhou China (type locality) was sequenced using Illumina Hiseq. Total length of its genome is 16,585?bp, including two rRNA genes, 22 tRNA genes, 13 protein-coding genes, and a control region. The general arrangement of genes is similar to the other chiropteran mitochondrial genomes. The phylogenetic inference indicates M. shuipuensis and M. leucogaster have closer phylogenetic relationship than other taxa that deposited in NCBI-nt. The complete mitochondrial genome provides valuable information for further taxonomic and phylogenetic researches.

SUBMITTER: Huang Z

PROVIDER: S-EPMC7706854 | biostudies-literature | 2019 Jul

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Mitochondrial genome of Murina shuipuensis (Chiroptera: Vespertilionidae) from Shuifu Village, Guizhou, China (type locality).

Huang Zhenglanyi Z Yue Yang Y Thapa Sanjan S Hu Yifeng Y Wu Yi Y Yu Wenhua W

Mitochondrial DNA. Part B, Resources 20190716 2

Murina shuipuensis, a small-sized forest bat with distinct bright orange-yellow ventral fur, is only found from its type locality thus far. In this study, a complete mitochondrial genome of a male individual of M. shuipuensis from Shuifu Village, Libo, Guizhou China (type locality) was sequenced using Illumina Hiseq. Total length of its genome is 16,585 bp, including two rRNA genes, 22 tRNA genes, 13 protein-coding genes, and a control region. The general arrangement of genes is si ...[more]

PMID: 33365638

Similar Datasets

The mitochondrial genome of Murina huttoni rubella (Chiroptera: Vespertilionidae) from China.

Project description:Murina huttoni rubella is a common Murina species in China, with a medium forearm length and reddish brown hairs. In this study, based on a male M. h. rubella individual from Jiangxi, China, its complete mitochondrial genome was sequenced and analyzed. The genome is 16,707?bp in length, including 22 tRNA genes, two rRNA genes, 13 protein-coding genes and a control region. The composition and arrangement of genes are similar to other bats. Phylogenetic trees that covered all released complete mitochondrial genome of bats were constructed using Bayesian Inference and maximum likelihood methods. Both phylogenetic results showed that M. h. rubella and M. ussuriensis have closer phylogenetic relationship. The complete mtDNA genome sequence of M. h. rubella would provide valuable information for solving taxonomic and phylogenetic problem in future.

| S-EPMC7800720 | biostudies-literature

Tube-nosed variations-a new species of the genus Murina (Chiroptera: Vespertilionidae) from China.

Project description:During a survey in 2014, several tube-nosed bats (Vespertilionidae: Murininae: Murina) were collected in Sichuan Province. Based on morphological characters, these bats did not match any species previously recorded from China. Morphometric analyses and phylogenetic inference based on mitochondrial and nuclear gene sequences indicated that they represented a new species, named here as Murina jinchui sp. nov. Although the new species is presently known only from Wolong National Nature Reserve, it is unlikely to be a rare species in the area based on our capture frequencies.

| S-EPMC6956718 | biostudies-literature

Mitochondrial genome of the Harpiocephalus harpia (Chiroptera: Vespertilionidae) from China.

Project description:In this study, a complete mitochondrial genome of a female Harpiocephalus harpia from Zhejiang Province, China, was sequenced using Illumina Hiseq. The genome is ∼16,400 bp in length, containing 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and a control region. Most of the genes were encoded on the H-strand, except for 8 tRNA and ND6 genes. Phylogenetic tree using maximum likelihood suggests H. harpia is sister taxon to Murina. The complete mitochondrial genome herein provides basic information for future taxonomic and phylogenetic studies.

| S-EPMC7748458 | biostudies-literature

The complete mitochondrial genome of Tylonycteris fulvida (Chiroptera: Vespertilionidae) in South China

Project description:Abstract The complete mitochondrial genome of Tylonycteris fulvida (Peters, 1872) was obtained using high-throughput sequencing technology. The genome is a circular molecule of 16,621 bp length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. A phylogenetic tree of 13 protein-coding genes was constructed using IQ-TREE. Our result suggests that T. fulvida cluster within Chiroptera and Fereuungulata. The complete mitochondrial genome sequence of T. fulvida will be helpful for future taxonomic and phylogenetic studies on Chiroptera.

| S-EPMC8547857 | biostudies-literature

The complete mitochondrial genome of Rhinolophus yunnanensis (Chiroptera: Vespertilionidae).

Project description:The mitochondrial genome of Rhinolophus yunnanensis (Chiroptera: Rhinolophidae) is a circular molecule of 16,865?bp in length with a base composition of 31.2% A, 24.3% T, 29.6% C, 14.9% G. In the control region of R. yunnanensis, the sequence of 5'-CAACGTATACACG-3' repeats 18 times. Phylogenetic analyses indicate that R. yunnanensis is a sister clade to ((Rhinolophus sinicus sinicus?+?R. sinicus sinicus)?+?(R. macrotis?+?(R. pumilus?+?R. monoceros))).

| S-EPMC7799680 | biostudies-literature

The complete mitochondrial genome of Kuhl's pipistrelle, Pipistrellus kuhlii (Chiroptera: Vespertilionidae).

Project description:The Kuhl's pipistrelle (Pipistrellus kuhlii) is a small, vespertilionid bat species, with a large range extending from the Iberian Peninsula into the Near East and the Arabian Peninsula. In this study, we determine for the first time the complete mitogenome of this species. The P. kuhlii mitogenome is 16,991 base pairs long with 37 genes and 1 control region, showing conserved gene content and order with other vertebrate mitogenomes. The length of the 22 tRNA genes ranges between 60 bp (tRNA-Ser) and 75 bp (tRNA-Leu). The D-loop region is 1553 bp long with low CG content (39.8%).

| S-EPMC7799936 | biostudies-literature

The complete mitochondrial genome of the Bechstein's bat, Myotis bechsteinii (Chiroptera, Vespertilionidae).

Project description:In this study, we present the complete mitochondrial genome of the Bechstein's bat, Myotis bechsteinii. The mitogenome is 17,151 bp in length and is AT-rich with base composition A (27.8%), C (22%), G (16.1%), and T (34.1%). The mitogenome shows conserved gene content and order similar with other mammalian mitogenomes, being composed of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and one control region. The majority of genes are encoded on the H-Strand except for ND6 and 8 tRNAs as found in other bat species. The field identification of Myotis bechsteinii was confirmed by phylogenetic analyses using datasets comprising whole mitogenomes and COXI. This mitogenome is a resource for future studies of Myotis bats and other mammals.

| S-EPMC7800535 | biostudies-literature

Complete mitochondrial genome of the East Asian fish-eating bat: Myotis ricketti (Chiroptera, Vespertilionidae).

Project description:I report the complete mitochondrial genome (mitogenome) of the East Asian fish-eating bat (Myotis ricketti or M. pilosus), also known as the Rickett's big footed bat. The total length of the circular M. ricketti mitogenome is 17,098 base pairs, containing 13 protein-coding genes (PCGs), two ribosomal RNAs, 22 transfer RNAs, and a non-coding control region (D-loop region). The gene order and organisation of this mitogenome are similar to most of other determined vertebrate mitogenomes, with the nucleotide base composition of A 34.22%, T 30.32%, C 22.80%, and G 12.66%. Besides, the mitogenomic D-loop region contains 29 copies of a tandem repeat sequence of six nucleotides (CATACG). The phylogenetic analysis indicates that M. ricketti is closely related to M. macrodactylus and M. petax. This study will contribute to the investigations of phylogeny and evolution for Myotis and its relevant taxa.

| S-EPMC7707413 | biostudies-literature

The complete mitochondrial genome of the far Eastern myotis: Myotis bombinus Thomas, 1906 in mainland of Korea (Chiroptera, Vespertilionidae).

Project description:We have determined the second mitochondrial genome of Myotis bombinus Thomas, 1906 in mainland of Korea. The circular mitogenome of M. bombinus is 17,035 bp long which is slightly shorter than that of the previous mitogenome of M. bombinus. It includes 13 protein-coding genes (PCGs), two ribosomal RNA genes, and 22 transfer RNAs. The base composition was AT-biased (66.1%). Fifty single nucleotide polymorphisms and 14 insertions were identified between two mitogenomes of M. bombinus. Phylogenetic trees show that both M. bominus mitogenomes are clustered in one clade.

| S-EPMC7894445 | biostudies-literature

Confirmation of the existence of Himalayan long-eared bats, Plecotushomochrous (Chiroptera, Vespertilionidae), in China.

Project description:The existence of Himalayan long-eared bats, Plecotushomochrous (Chiroptera, Vespertilionidae), in China has not been previously confirmed. In this study, four bats captured with harp traps from two sites in the Maoershan National Nature Reserve in Guangxi, China were investigated. These bats have long, wide auricles, each with a prominent tragus. The length of each auricle is about the same as that of a forearm. Hairs on the ventral fur have a dark base with mixed grey and yellowish tips; those on the dorsal fur also have a dark base and are bicolored with brown tips. The thumbs are very short. A concavity is present in the front of the dorsal side of the cranium. Based on morphological characteristics and phylogeny using Cyt b gene sequences, these bats were identified as P.homochrous, thus confirming the existence of Himalayan long-eared bats in China.

| S-EPMC10206652 | biostudies-literature