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Characterization of the complete chloroplast genome of Sargassum fusiforme and its phylogenomic position within phaeophyceae.

ABSTRACT: Sargassum fusiforme is an important economic seaweed in East Asia. In this study, we characterized the complete chloroplast genome sequence of S. fusiforme using PacBio long-read sequencing technology. It had a circular mapping molecular with the length of 124,286?bp, with a large single-copy region (LSC, 73,437?bp) and a small single copy region (SSC, 40,131?bp) separated by a pair of inverted repeats (IRs, 5,359?bp). The cp genome contained 173 genes including 139 protein-coding, 6 rRNA, and 28 tRNA genes. The phylogenomic analysis indicated that S. fusiforme is closely related to S. thunbergii.

SUBMITTER: Zhang Y 

PROVIDER: S-EPMC7707382 | biostudies-literature | 2019 Sep

REPOSITORIES: biostudies-literature

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Characterization of the complete chloroplast genome of <i>Sargassum fusiforme</i> and its phylogenomic position within phaeophyceae.

Zhang Yonghua Y   Wang Shengqin S   Qian Weiguo W   Shi Yijian Y   Li Nan N   Yan Xiufeng X   Zou Huixi H   Wu Mingjiang M  

Mitochondrial DNA. Part B, Resources 20190926 2

<i>Sargassum fusiforme</i> is an important economic seaweed in East Asia. In this study, we characterized the complete chloroplast genome sequence of <i>S. fusiforme</i> using PacBio long-read sequencing technology. It had a circular mapping molecular with the length of 124,286 bp, with a large single-copy region (LSC, 73,437 bp) and a small single copy region (SSC, 40,131 bp) separated by a pair of inverted repeats (IRs, 5,359 bp). The cp genome contained 173 genes including 139 protein-coding,  ...[more]

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