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The complete mitochondrial genome of an Asian longicorn beetle Dorysthenes granulosus (Coleoptera: Cerambycidae: Prioninae).

ABSTRACT: The complete mitogenome sequence of an Asian longicorn beetle Dorysthenes granulosus (Thomson 1860) was sequenced. The 15,858 bp long genome has the standard metazoan complement of 38 genes. These genes contain 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. The nucleotide composition of the D. granulosus mitogenome was A: 39.5%, T: 31.7%, G: 10.9%, C: 17.9%. The A＋T content was 71.2%, showing strong AT skew. Phylogenetic analysis indicated that D. granulosus have sister relationship with Dorysthenes paradoxus.

SUBMITTER: Zhou S

PROVIDER: S-EPMC7748657 | biostudies-literature |

REPOSITORIES: biostudies-literature

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The complete mitochondrial genome of an Asian longicorn beetle Glenea cantor (Coleoptera: Cerambycidae: Lamiinae).

Project description:The complete mitogenome sequence of an Asian longicorn beetle Glenea cantor, was sequenced. The 15,514 bp long genome has the standard metazoan complement of 38 genes. These genes contain 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. The nucleotide composition of the G. cantor mitogenome was A: 39.4%, T: 37.7%, G: 8.9%, C: 14.0%. The A + T content is 77.1%, showing strong AT skew. Phylogenetic analysis indicated that G. cantor have sister relationship with Thyestilla gebleri.

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Complete mitochondrial genome of an Asian longicorn beetle, Olenecamptus bilobus Fabricius (Coleoptera: Cerambycidae: Lamiinae).

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Project description:In this study, the complete mitochondrial genome of the Neoplocaederus obesus (GenBank accession number: MT525962) was sequenced. The 15,683 bp long genome has the standard metazoan complement of 38 genes. These genes contain 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. The nucleotide composition of the N. obesus mitogenome was A: 37.20%, T: 32.19%, G: 12.10%, C: 18.52%. The A＋T content was 69.39%, showing strong AT skew.

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The complete mitochondrial genomes of five longicorn beetles (Coleoptera: Cerambycidae) and phylogenetic relationships within Cerambycidae.

Project description:Cerambycidae is one of the most diversified groups within Coleoptera and includes nearly 35,000 known species. The relationships at the subfamily level within Cerambycidae have not been convincingly demonstrated and the gene rearrangement of mitochondrial genomes in Cerambycidae remains unclear due to the low numbers of sequenced mitogenomes. In the present study, we determined five complete mitogenomes of Cerambycidae and investigated the phylogenetic relationship among the subfamilies of Cerambycidae based on mitogenomes. The mitogenomic arrangement of all five species was identical to the ancestral Cerambycidae type without gene rearrangement. Remarkably, however, two large intergenic spacers were detected in the mitogenome of Pterolophia sp. ZJY-2019. The origins of these intergenic spacers could be explained by the slipped-strand mispairing and duplication/random loss models. A conserved motif was found between trnS2 and nad1 gene, which was proposed to be a binding site of a transcription termination peptide. Also, tandem repeat units were identified in the A + T-rich region of all five mitogenomes. The monophyly of Lamiinae and Prioninae was strongly supported by both MrBayes and RAxML analyses based on nucleotide datasets, whereas the Cerambycinae and Lepturinae were recovered as non-monophyletic.

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Cytoplasmic incompatibility in the semivoltine longicorn beetle Acalolepta fraudatrix (Coleoptera: Cerambycidae) double infected with Wolbachia.

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Complete mitochondrial genome of Oberea diversipes (Coleoptera, Cerambycidae).

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The Complete Mitochondrial Genome of the Longhorn Beetle Dorysthenes paradoxus (Coleoptera: Cerambycidae: Prionini) and the Implication for the Phylogenetic Relationships of the Cerambycidae Species.

Project description:The longhorn beetle Dorysthenes paradoxus (Faldermann, 1833) (Coleoptera: Cerambycidae) is not only a serious agricultural pest but also a traditionally edible insect in China. However, no genetic information on this species has been acquired. In the present study, we report the mitochondrial genome (mitogenome) of Do. paradoxus, as the first complete mitogenome of Prioninae. The circular mitogenome of 15,922 bp encodes 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), and two ribosomal RNAs (rRNAs), and it contains an A+T-rich region. This mitogenome exhibits the lowest A+T content (71.13%) but harbors the largest AT skew (0.116) among the completely sequenced Cerambycidae species. Eleven of the 13 PCGs have a typical ATN start codon, whereas COI and ND1 are tentatively designated by AAT and TTG, respectively. Only 4 of the 13 PCGs harbor a complete termination codon, and the remaining 9 possess incomplete termination codons (T or TA). Apart from tRNASer(AGN), the other 21 tRNAs can fold into a typical clover-leaf secondary structures. The Do. paradoxus A+T-rich region contains two poly-T stretches and a tandem repeat that comprises two 47-bp-long copies. Both Bayesian inference and Maximum likelihood analyses confirmed the subfamily ranks of Cerambycidae ([Prioninae + Cerambycinae] + Lamiinae) and the close relationship between Philinae and Prioninae/Cerambycinae. However, the data did not support the monophyly of Prioninae and Cerambycinae. The mitogenome presented here provides basic genetic information for this economically important species.

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Project description:Spondylis buprestoides is a major boring pest of Cerambycidae, which mainly damaging conifers and also can carry pine wood nematode, Bursaphelenchus xylophilus. In this study, the complete mitochondrial genome of S. buprestoides was determined by Illumina sequencing technology. The whole mitogenome was 15,837 bp in length with 20.05% GC content, which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Phylogenetic analysis showed that S. buprestoides was closely related to Lepturinae. The sequence data of S. buprestoides could provide useful genetic information for the studies on phylogenetic and evolutionary of Cerambycidae.

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Project description:In this study, we report the complete mitochondrial genome of Anoplistes halodendri, which covers a total of 15,697 bp in length with 28.27% GC content. The complete mitochondrial genome is composed of 12 protein-coding genes (PCGs) and also contains 22 transfer RNA genes (tRNAs) and two ribosomal RNA genes (rRNAs). Phylogenetic analysis of the A. halodendri with other 21 different species of Cerambycidae indicated that A. halodendri formed an isolated clade and belong to Cerambycinae. The results will be helpful to study the evolutionary relationship among the subfamilies of Cerambycidae.

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The complete mitochondrial genome of Arhopalus unicolor (Coleoptera: Cerambycidae).

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