Dataset Information

Beyond K-complex binary scoring during sleep: probabilistic classification using deep learning.

ABSTRACT:

Study objectives

K-complexes (KCs) are a recognized electroencephalography marker of sensory processing and a defining feature of sleep stage 2. KC frequency and morphology may also be reflective of sleep quality, aging, and a range of sleep and sensory processing deficits. However, manual scoring of K-complexes is impractical, time-consuming, and thus costly and currently not well-standardized. Although automated KC detection methods have been developed, performance and uptake remain limited.

Methods

The proposed algorithm is based on a deep neural network and Gaussian process, which gives the input waveform a probability of being a KC ranging from 0% to 100%. The algorithm was trained on half a million synthetic KCs derived from manually scored sleep stage 2 KCs from the Montreal Archive of Sleep Study containing 19 healthy young participants. Algorithm performance was subsequently assessed on 700 independent recordings from the Cleveland Family Study using sleep stages 2 and 3 data.

Results

The developed algorithm showed an F1 score (a measure of binary classification accuracy) of 0.78 and thus outperforms currently available KC scoring algorithms with F1 = 0.2-0.6. The probabilistic approach also captured expected variability in KC shape and amplitude within individuals and across age groups.

Conclusions

An automated probabilistic KC classification is well suited and effective for systematic KC detection for a more in-depth exploration of potential relationships between KCs during sleep and clinical outcomes such as health impacts and daytime symptomatology.

SUBMITTER: Lechat B

PROVIDER: S-EPMC7751135 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Similar Datasets

Project description:The last two decades have seen the emergence of a brand-new kind of music known as digital brain stimulant, also known as instrumental music or music without lyrics, which mostly comprises entrainment beats. While listening to it has the same ability to affect the brain as taking medication, it also has the risk of having a negative impact or encouraging unwanted behavior. This sparked the interest of a large number of studies in the psychological and physiological effects of music's brainwave entrainment beats on listeners. These studies started to categorize and examine how musical beats affected brainwave entrainment by looking at electroencephalogram (EEG) signals. Although this categorization represents a step forward for the early research efforts, it is constrained by the difficulty of having each musical track and conducting EEG tests on humans exposed to distortion due to noise in order to determine its influence. The work proposed in this article continues to explore this topic but in a novel, simple, accurate, and reliable categorization procedure based on the music signal elements themselves rather than dependent on EEG. VGGish and YAMNET based transfer deep learning models, are tuned to handle a straightforward, accurate real-time detector for the existence of the music beats inside music files with accuracy of 98.5 and 98.4, respectively. Despite the fact that they yield results that are equivalent, the YAMNET model is more suited for use with mobile devices due to its low power consumption and low latency. The article also proposes modified version of VGGish and YAMNET binary classifying models called BW-VGGish and BW-YAMNET respectively. The modification was to turn the binary classification into multi-classification. These multi-classifiers handle the classification of the influence of music beats (five different brain waves) on human brainwave entrainment with average accuracy of 94.5% and 94.5%, respectively. Since there was a lack of datasets addressing this kind of music, two datasets, the Brainwave Entrainment Beats (BWEB) dataset and the Brainwave Music Manipulation (BWMM) dataset, were generated for classification training and testing. The re-testing on a sample of music files that have their impact on brain waves (with their EEG) in an earlier study is done to strengthen the validity of the proposed work and to overcome the potential limitation of utilizing a music dataset that is not proved with its EEG. The success of the suggested models was demonstrated.

Project description:Study objectivesDevelopment of inter-database generalizable sleep staging algorithms represents a challenge due to increased data variability across different datasets. Sharing data between different centers is also a problem due to potential restrictions due to patient privacy protection. In this work, we describe a new deep learning approach for automatic sleep staging, and address its generalization capabilities on a wide range of public sleep staging databases. We also examine the suitability of a novel approach that uses an ensemble of individual local models and evaluate its impact on the resulting inter-database generalization performance.MethodsA general deep learning network architecture for automatic sleep staging is presented. Different preprocessing and architectural variant options are tested. The resulting prediction capabilities are evaluated and compared on a heterogeneous collection of six public sleep staging datasets. Validation is carried out in the context of independent local and external dataset generalization scenarios.ResultsBest results were achieved using the CNN_LSTM_5 neural network variant. Average prediction capabilities on independent local testing sets achieved 0.80 kappa score. When individual local models predict data from external datasets, average kappa score decreases to 0.54. Using the proposed ensemble-based approach, average kappa performance on the external dataset prediction scenario increases to 0.62. To our knowledge this is the largest study by the number of datasets so far on validating the generalization capabilities of an automatic sleep staging algorithm using external databases.ConclusionsValidation results show good general performance of our method, as compared with the expected levels of human agreement, as well as to state-of-the-art automatic sleep staging methods. The proposed ensemble-based approach enables flexible and scalable design, allowing dynamic integration of local models into the final ensemble, preserving data locality, and increasing generalization capabilities of the resulting system at the same time.