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Complete mitochondrial genome sequence of E. suratensis revealed by next generation sequencing.

ABSTRACT: The complete mitochondrial genome of Etroplus suratensis, the Green chromide cichlid, was determined for the first time through NGS method. The genome is 16,467?bp (Accession no. KU301747) in length and consisted of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and one control region. Organization of genes and their order are in accordance with other vertebrates. The overall base composition on plus strand was A: 28.3%, G: 15.2%, C: 30.9%, T: 25.6%, and the A?+?T content 53.9%. The control region contains a putative termination-associated sequence and three conserved sequence blocks. This mitogenome sequence data would play an important role in population genetics and phylogenetics of cichlid fish of India.

SUBMITTER: Mohanta SK

PROVIDER: S-EPMC7800130 | biostudies-literature | 2016 Nov

REPOSITORIES: biostudies-literature

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Complete mitochondrial genome sequence of E. suratensis revealed by next generation sequencing.

Mohanta Sudip K SK Swain Subrat K SK Das Sofia P SP Bit Amrita A Das Gargee G Pradhan Sanghamitra S Sundaray Jitendra K JK Jayasankar P P Ninawe A S AS Das Paramananda P

Mitochondrial DNA. Part B, Resources 20161121 1

The complete mitochondrial genome of Etroplus suratensis, the Green chromide cichlid, was determined for the first time through NGS method. The genome is 16,467 bp (Accession no. KU301747) in length and consisted of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and one control region. Organization of genes and their order are in accordance with other vertebrates. The overall base composition on plus strand was A: 28.3%, G: 15.2%, C: 30.9%, T: 25.6%, and the A + T content 53.9%. The ...[more]

PMID: 33473612

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