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Differential regulation of triterpene biosynthesis induced by an early failure in cuticle formation in apple.

ABSTRACT: Waxy apple cuticles predominantly accumulate ursane-type triterpenes, but the profile shifts with the induction of skin russeting towards lupane-type triterpenes. We previously characterised several key enzymes in the ursane-type and lupane-type triterpene pathways, but this switch in triterpene metabolism associated with loss of cuticle integrity is not fully understood. To analyse the relationship between triterpene biosynthesis and russeting, we used microscopy, RNA-sequencing and metabolite profiling during apple fruit development. We compared the skin of three genetically-close clones of 'Golden Delicious' (with waxy, partially russeted and fully russeted skin). We identified a unique molecular profile for the russet clone, including low transcript abundance of multiple cuticle-specific metabolic pathways in the early stages of fruit development. Using correlation analyses between gene transcription and metabolite concentration we found MYB transcription factors strongly associated with lupane-type triterpene biosynthesis. We showed how their transcription changed with the onset of cuticle cracking followed by russeting and that one factor, MYB66, was able to bind the promoter of the oxidosqualene cyclase OSC5, to drive the production of lupeol derivatives. These results provide insights into the breakdown of cuticle integrity leading to russet and how this drives MYB-regulated changes to triterpene biosynthesis.

SUBMITTER: Falginella L

PROVIDER: S-EPMC8012369 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:Russeting compromises appearance and downgrades the market value of many fruitcrops, including of the mango cv. 'Apple'. The objective was to identify the mechanistic basis of 'Apple' mango's high susceptibility to russeting. We focused on fruit growth, cuticle deposition, stress/strain relaxation analysis and the mechanical properties of the cuticle. The non-susceptible mango cv. 'Tommy Atkins' served for comparison. Compared with 'Tommy Atkins', fruit of 'Apple' had a lower mass, a smaller surface area and a lower growth rate. There were little differences between the epidermal and hypodermal cells of 'Apple' and 'Tommy Atkins' including cell size, cell orientation and cell number. Lenticel density decreased during development, being lower in 'Apple' than in 'Tommy Atkins'. The mean lenticel area increased during development but was consistently greater in 'Apple' than in 'Tommy Atkins'. The deposition rate of the cuticular membrane was initially rapid but later slowed till it matched the area expansion rate, thereafter mass per unit area was effectively constant. The cuticle of 'Apple' is thinner than that of 'Tommy Atkins'. Cumulative strain increased sigmoidally with fruit growth. Strains released stepwise on excision and isolation (εexc+iso), and on wax extraction (εextr) were higher in 'Apple' than in 'Tommy Atkins'. Membrane stiffness increased during development being consistently lower in 'Apple' than in 'Tommy Atkins'. Membrane fracture force (Fmax) was low and constant in developing 'Apple' but increased in 'Tommy Atkin'. Membrane strain at fracture (εmax) decreased linearly during development but was lower in 'Apple' than in 'Tommy Atkins'. Frequency of membrane failure associated with lenticels increased during development and was consistently higher in 'Apple' than in 'Tommy Atkins'. The lower rate of cuticular deposition, the higher strain releases on excision, isolation and wax extraction and the weaker cuticle account for the high russet susceptibility of 'Apple' mango.

Project description:BACKGROUND: The number of fibrous roots that develop into storage roots determines sweetpotato yield. The aim of the present study was to identify the molecular mechanisms involved in the initiation of storage root formation, by performing a detailed transcriptomic analysis of initiating storage roots using next-generation sequencing platforms. A two-step approach was undertaken: (1) generating a database for the sweetpotato root transcriptome using 454-Roche sequencing of a cDNA library created from pooled samples of two root types: fibrous and initiating storage roots; (2) comparing the expression profiles of initiating storage roots and fibrous roots, using the Illumina Genome Analyzer to sequence cDNA libraries of the two root types and map the data onto the root transcriptome database. RESULTS: Use of the 454-Roche platform generated a total of 524,607 reads, 85.6% of which were clustered into 55,296 contigs that matched 40,278 known genes. The reads, generated by the Illumina Genome Analyzer, were found to map to 31,284 contigs out of the 55,296 contigs serving as the database. A total of 8,353 contigs were found to exhibit differential expression between the two root types (at least 2.5-fold change). The Illumina-based differential expression results were validated for nine putative genes using quantitative real-time PCR. The differential expression profiles indicated down-regulation of classical root functions, such as transport, as well as down-regulation of lignin biosynthesis in initiating storage roots, and up-regulation of carbohydrate metabolism and starch biosynthesis. In addition, data indicated delicate control of regulators of meristematic tissue identity and maintenance, associated with the initiation of storage root formation. CONCLUSIONS: This study adds a valuable resource of sweetpotato root transcript sequences to available data, facilitating the identification of genes of interest. This resource enabled us to identify genes that are involved in the earliest stage of storage root formation, highlighting the reduction in carbon flow toward phenylpropanoid biosynthesis and its delivery into carbohydrate metabolism and starch biosynthesis, as major events involved in storage root initiation. The novel transcripts related to storage root initiation identified in this study provide a starting point for further investigation into the molecular mechanisms underlying this process.

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Differential regulation of triterpene biosynthesis induced by an early failure in cuticle formation in apple.

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