Ontology highlight
ABSTRACT:
SUBMITTER: Ciobanu D
PROVIDER: S-EPMC8042348 | biostudies-literature | 2021 Apr
REPOSITORIES: biostudies-literature
Ciobanu Doina D Clum Alicia A Ahrendt Steven S Andreopoulos William B WB Salamov Asaf A Chan Sandy S Quandt C Alisha CA Foster Brian B Meier-Kolthoff Jan P JP Tang Yung Tsu YT Schwientek Patrick P Benny Gerald L GL Smith Matthew E ME Bauer Diane D Deshpande Shweta S Barry Kerrie K Copeland Alex A Singer Steven W SW Woyke Tanja T Grigoriev Igor V IV James Timothy Y TY Cheng Jan-Fang JF
iScience 20210310 4
Single-cell sequencing of environmental microorganisms is an essential component of the microbial ecology toolkit. However, large-scale targeted single-cell sequencing for the whole-genome recovery of uncultivated eukaryotes is lagging. The key challenges are low abundance in environmental communities, large complex genomes, and cell walls that are difficult to break. We describe a pipeline composed of state-of-the art single-cell genomics tools and protocols optimized for poorly studied and unc ...[more]