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Thermal Analysis of a Mixture of Ribosomal Proteins by vT-ESI-MS: Toward a Parallel Approach for Characterizing the Stabilitome.


ABSTRACT: The thermal stabilities of endogenous, intact proteins and protein assemblies in complex mixtures were characterized in parallel by means of variable-temperature electrospray ionization coupled to mass spectrometry (vT-ESI-MS). The method is demonstrated by directly measuring the melting transitions of seven proteins from a mixture of proteins derived from ribosomes. A proof-of-concept measurement of a fraction of an Escherichia coli lysate is provided to extend this approach to characterize the thermal stability of a proteome. As the solution temperature is increased, proteins and protein complexes undergo structural and organizational transitions; for each species, the folded ↔ unfolded and assembled ↔ disassembled populations are monitored based on changes in vT-ESI-MS charge state distributions and masses. The robustness of the approach illustrates a step toward the proteome-wide characterization of thermal stabilities and structural transitions-the stabilitome.

SUBMITTER: El-Baba TJ 

PROVIDER: S-EPMC8546744 | biostudies-literature | 2021 Jun

REPOSITORIES: biostudies-literature

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Thermal Analysis of a Mixture of Ribosomal Proteins by vT-ESI-MS: Toward a Parallel Approach for Characterizing the <i>Stabilitome</i>.

El-Baba Tarick J TJ   Raab Shannon A SA   Buckley Rachel P RP   Brown Christopher J CJ   Lutomski Corinne A CA   Henderson Lucas W LW   Woodall Daniel W DW   Shen Jiangchuan J   Trinidad Jonathan C JC   Niu Hengyao H   Jarrold Martin F MF   Russell David H DH   Laganowsky Arthur A   Clemmer David E DE  

Analytical chemistry 20210608 24


The thermal stabilities of endogenous, intact proteins and protein assemblies in complex mixtures were characterized in parallel by means of variable-temperature electrospray ionization coupled to mass spectrometry (vT-ESI-MS). The method is demonstrated by directly measuring the melting transitions of seven proteins from a mixture of proteins derived from ribosomes. A proof-of-concept measurement of a fraction of an <i>Escherichia coli</i> lysate is provided to extend this approach to character  ...[more]

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