Spatial transcriptomics Visium data for human IPF and control lungs

ABSTRACT: Visium (10x Genomics) spatially resolved transcriptomics data generated from normal and Idiopathic Pulmonary Fibrosis (IPF) lung parenchyma tissues collected from human donors. The fresh-frozen tissues that were analyzed were from four healthy control (HC) subjects and from four IPF patients. For each IPF patient, three different tissues were selected representing areas of mild (“B1”), moderate (“B2") or severe (“B3”) fibrosis within the same donor, as determined by histological inspection of Hematoxylin and Eosin (H&E)-stained samples. Data from a total of 25 tissue sections, from 16 unique lung tissue blocks. The lung tissues were collected post-mortem (HC donors) or during lung transplant/resection (IPF patients) after obtaining informed consent. The study protocols were approved by th

ORGANISM(S): Homo sapiens (human)

SUBMITTER:  

PROVIDER: S-BSST1410 | biostudies-other |

SECONDARY ACCESSION(S): https://www.biorxiv.org/content/10.1101/2023.12.21.572330v1

REPOSITORIES: biostudies-other