Genomics

Dataset Information

0

Genome-wide maps of HDA6pro::HDA6:GFP in 14 days old arabidopsis

ABSTRACT: We report the application of single-molecule-based sequencing technology for high-throughput profiling of HDA6 in 14 days old arabidopsis. By obtaining sequence from chromatin immunoprecipitated DNA, we generated genome-wide HDA6-binding maps of 14 days old arabidopsis. To reveal bound genes by HDA6, chimeric protein HDA6-GFP was expressed under HDA6 promoter in hda6 (HDA6pro:HDA6:GFP/ hda6). ChIP was performed using anti-GFP antibody (ab290; ABCAM), and ChIP DNA were analyzed by Illumina HiSeq 2500.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE132563 | GEO | 2021/03/30

REPOSITORIES: GEO

Json Xml

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

Genomics Genome-wide maps of H3Ac in 14 days old WT, hda6, ldl1/2 and hda6/ldl1/2 arabidopsis
2021-03-30 | GSE132636 | GEO
Genomics Genome-wide maps of H3K4me2 in 14 days old WT, hda6, ldl1/2 and hda6/ldl1/2 arabidopsis
2021-03-30 | GSE133005 | GEO
Genomics Genome-wide maps of LDL1pro::LDL1:GFP in 14 days old arabidopsis
2018-08-19 | GSE118025 | GEO
Genomics Genome-wide maps of HDA6pro::HDA6:GFP in 14 days old arabidopsis
| PRJNA548365 | ENA
Genomics RNA-seq of 14 days old arabidopsis in Col hda6 ldl1/2 and hda6/ldl1/2
| PRJNA549307 | ENA
Genomics Genome-wide maps of JMJ28pro::JMJ28:3xFLAG in 14 days old arabidopsis
2021-03-30 | GSE155623 | GEO
Genomics Genome-widebinding maps of arabidopsis WRKY63
2022-09-13 | GSE177884 | GEO
Genomics Genome-wide maps of H3K4me2 in 14 days old WT, hda6, ldl1/2 and hda6/ldl1/2 arabidopsis
| PRJNA549686 | ENA
Genomics Genome-wide maps of H3Ac in 14 days old WT, hda6, ldl1/2 and hda6/ldl1/2 arabidopsis
| PRJNA548566 | ENA
Transcriptomics RNA-seq of 14 days old arabidopsis in Col hda6 ldl1/2 and hda6/ldl1/2
2021-03-30 | GSE132873 | GEO