Transcriptomics

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Analysis of transcriptome, selected intracellular signaling pathways, proliferation and apoptosis of LNCaP cells exposed to high leptin concentration


ABSTRACT: The androgen-sensitive LNCaP line of prostate cancer cells is one of the most commonly used cells in oncological research. These include, but are not limited to, research into the influence of leptin (LEP) on prostate cancer. However, the results of studies on the effects of this cytokine on the proliferation and apoptosis of LNCaP cells are controversial. Therefore, we performed studies on the effects of high LEP concentration (1x10-6 M) on gene expression profile, change of selected signaling pathways, proliferation and apoptosis of LNCaP cells. RTCA (real-time cell analyzer) revealed inhibitory effect of LEP on cell proliferation, but lower LEP concentrations (10-8 and 10-10 M) did not affect cell division. Within 24 h LEP (10-6 M) increases expression of 297 genes and decreases expression of 119 genes. Differentially expressed genes (DEGs) were subjected to functional annotation and clusterization using the DAVID bioinformatics tools Most ontological groups are associated with proliferation and apoptosis (7 groups), immune response (6) and extracellular matrix (2). These results were confirmed by the Gene Set Enrichment Analysis (GSEA). The leptin's effect on apoptosis stimulation was also confirmed using Pathview library. These results were also confirmed by qPCR method. The results of Western Blot analysis (exposure to LEP 10 min, 1, 2, 4 and 24h) suggest (after 24 h) decrease of p38 MAPK, p44-42 mitogen-activated protein kinase and Bcl-2 phosphorylated at threonine 56. Moreover, exposure of LNCaP cells to LEP significantly stimulates the secretion of matrix metallopeptidase 7 (MMP7). Obtained results suggest activation of apoptotic processes in LNCaP cells cultured at high LEP concentration. At the same time, this activation is accompanied by inhibition of proliferation of the tested cells.

ORGANISM(S): Homo sapiens

PROVIDER: GSE133616 | GEO | 2019/07/02

REPOSITORIES: GEO

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