Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Extended archaeal histone-based chromatin structure regulates global gene expression in Thermococcus kodakarensis

ABSTRACT: Using the model organism Thermococcus kodakarensis, we genetically alter the chromatin landscape and quantify the resultant changes in gene expression, including unanticipated and significant impacts on provirus transcription. Global transcriptome changes resultant from varying chromatin landscapes reveal the regulatory importance of higher-order histone-based chromatin architectures in regulating gene expression.

ORGANISM(S): Thermococcus kodakarensis

PROVIDER: GSE151920 | GEO | 2021/03/17

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Thermococcus kodakarensis

Project description:Thermococcus kodakarensis bisulfite-sequenced RNA

| PRJNA937301 | ENA

Thermococcus kodakarensis KOD1

Project description:Thermococcus kodakarensis KOD1 Epigenomics

| PRJNA209412 | ENA

Microarray analysis of the hyperthermophilic archaeon Thermococcus kodakarensis grown at lowest growth temperature

Project description:A hyperthermophilic archaeon Thermococcus kodakarensis can grow in a wide range of temperatures from 60°C to 93°C, optimally at 85°C. To screen the genes that being specifically expressed at lowest growth temperature, 60°C, we investigated the transcriptional profilings of T. kodakarensis grown at 60˚C by comparing with those grown at 85°C.

2016-04-01 | GSE71987 | GEO

Thermococcus kodakarensis

Project description:Thermococcus kodakarensis TK2045 project, whole genome sequence reads

| PRJNA1154289 | ENA

Thermococcus kodakarensis

Project description:Thermococcus kodakarensis strains deleted for RNA modifying enzymes, WGS reads

| PRJNA1125032 | ENA

Extended archaeal histone-based chromatin structure regulates global gene expression in Thermococcus kodakarensis

Project description:Extended archaeal histone-based chromatin structure regulates global gene expression in Thermococcus kodakarensis

| PRJNA637645 | ENA

Thermococcus kodakarensis strain:TS901

Project description:Thermococcus kodakarensis strain:TS901 Genome sequencing

| PRJNA928457 | ENA

Thermococcus kodakarensis KOD1

Project description:Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

| PRJNA242777 | ENA

Microarray analysis of the hyperthermophilic archaeon Thermococcus kodakarensis grown at lowest growth temperature

Project description:A hyperthermophilic archaeon Thermococcus kodakarensis can grow in a wide range of temperatures from 60Â°C to 93Â°C, optimally at 85Â°C. To screen the genes that being specifically expressed at lowest growth temperature, 60Â°C, we investigated the transcriptional profilings of T. kodakarensis grown at 60ËC by comparing with those grown at 85Â°C. One-condition experiment, KU216 grown at optimal growth temperature, 85Â°C vs. KU216 grown at lowest growth temperature, 60Â°C. Technical replicates: 2 KU216 grown at 60Â°C, independently measured. One replicate per array.

2016-04-01 | E-GEOD-71987 | biostudies-arrayexpress

Thermococcus kodakarensis

Project description:Microarray analysis of the hyperthermophilic archaeon Thermococcus kodakarensis grown at lowest growth temperature

| PRJNA292671 | ENA