Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Methylation analysis of STAT3 targets in gastric cancer patient samples

ABSTRACT: To investigate the differences of STAT3-mediated DNA methylation in gastric cancer patient samples, genome wide DNA methylation profiling for STAT3-positive/negative patient samples

ORGANISM(S): Homo sapiens

PROVIDER: GSE162731 | GEO | 2023/12/05

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Methylation analysis of STAT3 targets in gastric cancer patient samples

Project description:Methylation analysis of STAT3 targets in gastric cancer patient samples

| PRJNA682787 | ENA

Methylation analysis of STAT3 targets in gastric cancer cells

Project description:To investigate the knockdown effect of STAT3 on DNA methylation on gastric cancer cells, genome wide DNA methylation profiling of AGS transfected with pLKO.1-puro-shGFP or shSTAT3 generated from Illumina Infinium MethylationEPIC.

2019-06-04 | GSE109541 | GEO

Methylation analysis of STAT3 targets in gastric cancer cells

Project description:Methylation analysis of STAT3 targets in gastric cancer cells

| PRJNA431359 | ENA

Epigenetic analysis of gastric cancer

2012-10-24 | GSE30601 | GEO

DNA methylation analysis in normal gastric epithelial cells and gastric cancer cell lines

Project description:Genome wide DNA methylation profiling of normal gastric epuithelial cells and gastric cancer cell lines. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 450,000 CpGs. Samples included 2 normal gastric epithelial cells and 14 gastric cancer cells.

2020-08-31 | GSE136244 | GEO

Epigenome analysis of normal and gastric cardia cancer samples

Project description:Genome wide DNA methylation profiling of normal and gastric cardia cancer samples. The Illumina Infinium 850k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 850,000 CpGs in normal and gastric cardia cancer samples. Samples included 8 normal -gastrica cardia cancer paired tissues.

2023-01-01 | GSE200484 | GEO

Gastric Cancer Subtyping (Australian Patient Cohort)

Project description:Genome-wide mRNA expression profiles of 70 primary gastric tumors from the Australian patient cohort. Like many cancers, gastric adenocarcinomas (gastric cancers) show considerable heterogeneity between patients. Thus, there is intense interest in using gene expression profiles to discover subtypes of gastric cancers with particular biological properties or therapeutic vulnerabilities. Identification of such subtypes could generate insights into the mechanisms of cancer progression or lay the foundation for personalized treatments. Here we report a robust gene-xpression-based clustering of a large collection of gastric adenocarcinomas from Singaporean patients [GSE34942 and GSE15459]. We developed and validated a classifier for the three subtypes in Australian patient cohort. Profiling of 70 primary gastric tumors on Affymetrix GeneChip Human Genome U133 Plus 2.0 Array. All tumors were collected with approvals from Peter MacCallum Cancer Center, Australia; the Research Ethics Review Committee; and signed patient informed consent.

2012-07-04 | E-GEOD-35809 | biostudies-arrayexpress

Identification of cell-free DNA in gastric cancer patient

Project description:cfDNA (Cell-free DNA) was extracted from serum exosome of gastric cancer patient. We analyzed cfDNA by aCGH (array comparative genomic hybridization).

2018-03-31 | GSE108602 | GEO

Epigenetic analysis of gastric cancer

Project description:Genome-wide DNA methylation profiling of gastric tumors and matched gastric non-malignant samples. The Illumina HumanMethylation27 BeadChip was used to obtain DNA methylation profiles across 27,578 CpGs in 203 gastric tumors and 94 matched non-malignant gastric samples. Bisulphite-converted DNA from the 203 gastric tumors and 94 matched gastric non-malignant samples was hybridized to the Illumina HumanMethylation27 BeadChip.

2012-10-24 | E-GEOD-30601 | biostudies-arrayexpress

Gastric Cancer Subtyping (Australian Patient Cohort)

2012-07-05 | GSE35809 | GEO