Transcriptomics

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Transcriptomes of Wild Type tomato and sllbd40 fruit on different fruit stages


ABSTRACT: In order to find the gene which were regulated by SlLBD40, the fruits of WT and SlLBD40-KO-5 line were collected at 25 DDA to do the RNA-Seq. Total RNA was extracted from above tomato fruits by TRIzol reagent and three biological replicates were taken. The clean data were aligned to the tomato reference genome release SL2.50. According to the RNA-Seq data, many development-related genes were down-regulated in SlLBD40-KO-5 fruit. We find the potential SlLBD40-regulated genes.

ORGANISM(S): Solanum lycopersicum

PROVIDER: GSE190128 | GEO | 2024/12/01

REPOSITORIES: GEO

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