Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The expression profiles of 82 novel and 245 known human imsRNAs

ABSTRACT: The expression profiling of 245 known and 82 novel imsRNAs (intermediate-size noncoding RNAs, 50-500nt, which were identified from human fetal brain tissue) across different human fetal tissues (brain, heart, liver, lung and spleen at the 24-week gestation stage), different fetal brain gestational stages (13w, 14w, 20w, and 24w) and two human brain tumor cell lines (SHSY-5Y and U251).

ORGANISM(S): Homo sapiens

PROVIDER: GSE26196 | GEO | 2010/12/21

SECONDARY ACCESSION(S): PRJNA135027

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

The expression profiles of 82 novel and 245 known human imsRNAs

Project description:The expression profiling of 245 known and 82 novel imsRNAs (intermediate-size noncoding RNAs, 50-500nt, which were identified from human fetal brain tissue) across different human fetal tissues (brain, heart, liver, lung and spleen at the 24-week gestation stage), different fetal brain gestational stages (13w, 14w, 20w, and 24w) and two human brain tumor cell lines (SHSY-5Y and U251). The analysis was based on the loop design method, in which all combinations of two samples were simultaneously hybridized to a microarray, each of the two sample labeled with a different fluorescent probe (Cy3 or Cy5).

2010-12-21 | E-GEOD-26196 | biostudies-arrayexpress

Gene expression profile of human neuroblastoma cell line SHSY-5Y after LMO1 knockdown

Project description:To dissect molecular pathways regulated by LMO1 in neuroblastoma, we performed microarray gene expression profiling in a neuroblastoma cells (SHSY-5Y) after LMO1 knockdown.

2019-11-10 | GSE130747 | GEO

Project description:Overexpression of mir2392 in Human SHSY-5Y cells

| PRJNA763393 | ENA

Homo sapiens

Project description:SAFB1 iCLIP in SHSY-5Y cells

| PRJNA304373 | ENA

SAFB1 function

Project description:Human Exon 1.0 ST Affymetrix array data from SHSY-5Y cells

| PRJEB11816 | ENA

Identifying novel roles for SAFB1

Project description:Human Exon 1.0 ST Affymetrix array data from SHSY-5Y cells

| PRJEB11815 | ENA

Homo sapiens

Project description:Human Exon 1.0 ST Affymetrix array data from SHSY-5Y cells

| PRJNA304374 | ENA

Gene expression profiling of SHSY5Y cells exposed to manganese

Project description:The trace element manganese is essential for normal development for all the organisms. Overexposure of manganese may leads to multiple neuronal disorders such as Parkinson, manganism. To explore the molecular mechanism of manganese induced neurotoxicity, gene expression profiling was performed on human neuroblastoma SHSY-5Y cells. Cells were exposed to sub-lethal concentration of manganese (100 μM) for 24 hrs. Our result demonstrates that manganese alter multiple biological pathways including chromatin assembly, neurogenesis and apoptotic pathways.Cells grown in 75mm2 flask. three replicates for each sample

2016-07-01 | GSE70845 | GEO

Chromatin immunoprecipitation of REST/NRSF

Project description:ENCODE ChIP-chip study using 8 diverse human cell lines; 4 of neural origin (NB69, KELLY, SHSY-5Y, U373) and 4 of non-neural origin (HeLa, HepG2, HEK293 and K562) and anti-REST/NRSF antibody (Santa Cruz Biotech; sc-25398 aka H290) to asses REST-genome interactions across 1% of the human genome used in the pilot phase of the ENCODE project. Additionally the REST binding profile in K562 cells that had been transfected with REST specific siRNA oligos (72h and 96h) were determined revealing genomic in vivo binding affinity hierarchies for REST. Additionally the REST binding profile in K562 cells that had been transfected with REST specific siRNA oligos (72h and 96h) were determined

2009-03-31 | E-TABM-660 | biostudies-arrayexpress

Project description:Ribo-seq analysis of SHSY-5Y neuronal differentiation model

| PRJNA1001994 | ENA