Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression analysis of mouse adipose tissue macrophages

ABSTRACT: We collected adipose tissue macrophages from C57Black/6 mice on postnatal day 6 (P6) and postnatal day 56 (P56) by enzyntic digestion of the inguinal fat depots and megnetic cell sorting of F4/80 antigen positive macrophages. Total RNA was isolated and used for next generation RNA sequencing.

ORGANISM(S): Mus musculus

PROVIDER: GSE274818 | GEO | 2024/10/29

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

RNA sequencing of extracellular vesicles, secreted by young and adult mouse adipocytes [miRNA-Seq]

Project description:We used male C57BL/6 mice (Charles River Laboratories, Wilmington, MA), housed under SPF conditions. Primary adipocytes from the inguinal fat depot at postnatal day (P6, young mice) and postnatal day 56 (P56, adult mice) were isolated by collagenase digestion and separation of cell fractions and subsequently cultured in EV-free media (FBS was EV-depleted). Article: Röszer T., MicroRNA Profile of Mouse Adipocyte-Derived Extracellular Vesicles

2024-08-01 | GSE193589 | GEO

RNA sequencing of extracellular vesicles, secreted by young and adult mouse adipocytes [RNA-Seq]

2024-08-01 | GSE191256 | GEO

mRNA sequencing data of inguinal adipose tissue (iAT) of mice at postnatal day 6 (P6) and 56 (P56)

Project description:mRNA sequencing data of inguinal adipose tissue (iAT) of mice at postnatal day 6 (P6) and 56 (P56)

| PRJNA768667 | ENA

Transcriptional changes caused by ablation of neuropeptide FF receptor-1 (NPFFR1)

Project description:We compared inguinal fat depots of wild-type (WT) and NPFFR1 deficient (NPFFR1-KO) mice at postnatal day 6. In this project, we sequence 6 samples used DNBseq platform, averagely generating about 32.03 M reads per sample. The average mapping ratio with reference genome is 95.49%, the average mapping ratio with gene is 73.18%; A total of 19,886 genes were detected.

2023-10-24 | GSE154925 | GEO

Gene expression in inflammatory macrophages, tissue resident macrophages and neutrophils

2016-07-01 | GSE74783 | GEO

Hedgehog activation promotes osteogenic fates of growth plate resting zone chondrocytes through transient clonal competency [NovaA-186]

Project description:A single cell transcriptional profile of growth plate cells of the murine femur at postnatal day 36 (P36), lineage-marked by PTHrP-creER at P6

2023-10-11 | GSE244880 | GEO

Gene expression in inflammatory macrophages, tissue resident macrophages and neutrophils

Project description:Genes expression in Ly6C+/F4/80+ inflammatory macrophages, CX3CR1+/F4/80+ tissue resident macrophages and Ly6G+/F4/80- neutrophils which were isolated from day 3 wounds in C57/B6 mice aged 8 weeks by cell sorting Ly6C+ macrophages expressed higher (over 5 folds) levels of 241 genes compared to CX3CR1+ macrophages, and 3382 genes compared to neutrophils

2016-07-01 | E-GEOD-74783 | biostudies-arrayexpress

Hedgehog activation promotes osteogenic fates of growth plate resting zone chondrocytes through transient clonal competency [NovaA-237]

Project description:A single cell transcriptional profile of growth plate cells of the murine femur at postnatal day 36 (P36), lineage-marked by PTHrP-creER at P6, Control

2023-10-11 | GSE244881 | GEO

Expression data from multiple mouse adipose depots

Project description:Comparing gene expression profiles of murine subcutaneous vs. visceral adipose tissue. Gene expression was analyzed in two subcutaneous depots (inguinal and axillary) and two visceral depots (epididymal and mesenteric) from male C57Bl/6 mice. 4 samples were analyzed as two groups: inguinal and axillary (subcutaneous) and epididymal and mesenteric (visceral). Each sample was derived by pooling RNA from the relevant fat depot from 3 age-matched, male C57Bl6 mice.

2014-01-16 | E-GEOD-53307 | biostudies-arrayexpress

Single-cell RNAseq analysis of CXCL12+ mesenchymal cells of the murine molar

Project description:A single cell transcriptional profile of mesenchymal cells in the murine molar marked by CXCL12-GFP, Col1a1-GFP or CXCL12-creER+ cells at postnatal day 6 or 25 (P6 or P25)

2023-12-01 | GSE248300 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data