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Long-term Salt & Water Stress in Grapes

ABSTRACT: Potted Cabernet Sauvignon vines in the greenhouse were exposed to irrigated controls, non-irrigated water-deficits, and saline treatments for 16 days. Plant shoot tips were harvested every 4 days (0,4,8,12, and 16 days) to measure the progression of changes of global gene expression due to the stress. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Grant Cramer. The equivalent experiment is VV2 at PLEXdb.

ORGANISM(S): Vitis vinifera

PROVIDER: GSE31677 | GEO | 2011/08/26

SECONDARY ACCESSION(S): PRJNA145375

REPOSITORIES: GEO

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Long-term Salt & Water Stress in Grapes

Project description:Potted Cabernet Sauvignon vines in the greenhouse were exposed to irrigated controls, non-irrigated water-deficits, and saline treatments for 16 days. Plant shoot tips were harvested every 4 days (0,4,8,12, and 16 days) to measure the progression of changes of global gene expression due to the stress. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Grant Cramer. The equivalent experiment is VV2 at PLEXdb. time: Day 0 - stress: Control(3-replications); time: Day 4 - stress: Control(3-replications); time: Day 4 - stress: Water-Deficit(3-replications); time: Day 4 - stress: Salinity(3-replications); time: Day 8 - stress: Control(3-replications); time: Day 8 - stress: Water-Deficit(3-replications); time: Day 8 - stress: Salinity(3-replications); time: Day 12 - stress: Control(3-replications); time: Day 12 - stress: Water-Deficit(3-replications); time: Day 12 - stress: Salinity(3-replications); time: Day 16 - stress: Control(3-replications); time: Day 16 - stress: Water-Deficit(3-replications); time: Day 16 - stress: Salinity(3-replications)

2011-08-25 | E-GEOD-31677 | biostudies-arrayexpress

Grape skin transcriptome in the berries grown on the vine treated with exogenous abscisic acid

2011-08-27 | GSE31664 | GEO

High temperature effect on Cabernet Sauvignon berries

2011-08-26 | GSE31675 | GEO

Grape skin transcriptome in the berries grown on the vine treated with exogenous abscisic acid

Project description:The experiment was conducted using grapevines of Cabernet Sauvignon grown in a field. At veraison, the clusters in the vines were sprayed with a 400 mgl-1(+)-abscisic acid (ABA) solution. The ABA treated berries and non-treated berries (control) were harvested at 14 and 28 days after veraison and peeled. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Kazuya Koyama. The equivalent experiment is VV16 at PLEXdb. ABA treated - developmental stage name: 14 days after veraison(3-replications); ABA treated - developmental stage name: 28 days after veraison(3-replications); untreated (control) - developmental stage name: 14 days after veraison(3-replications); untreated (control) - developmental stage name: 28 days after veraison(3-replications)

2011-08-26 | E-GEOD-31664 | biostudies-arrayexpress

High temperature effect on Cabernet Sauvignon berries

Project description:The experiment was conducted using four 11-year-old potted grapevines of V. vinifera L. cv. Cabernet Sauvignon grafted on SO4 (Selection Oppenheim No. 4) grown in a phytotron. Vines were trained on a Guyot trellising system and each vine carried 4-10 clusters of grapes. The experiment started approximately 1 week before veraison, when berry softening started, and continued to fruit maturity. The two temperature regimes consisted of a high day (06.00–20.00 h) temperature (max.35C) and a control (max. 25C). Under both conditions, the night-time (20.00–06.00 h) temperature was 20C. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Kentaro Mori. The equivalent experiment is VV9 at PLEXdb developmental stage: 2 weeks - temperature: High (2-replications); developmental stage: 2 weeks - temperature: Control(2-replications); developmental stage: 4 weeks - temperature: High (2-replications); developmental stage: 4 weeks - temperature: Control(2-replications); developmental stage: 6 weeks - temperature: High (2-replications); developmental stage: 6 weeks - temperature: Control(2-replications)

2011-08-25 | E-GEOD-31675 | biostudies-arrayexpress

Grape skin transcriptome in the berries cultured in vitro treated with exogenous abscisic acid

2011-08-26 | GSE31662 | GEO

short term abiotic stress Cabernet Sauvignon

Project description:Cabernet Sauvignon plants grown in a hydroponic drip system were treat with 120 mM salt (10:1 NaCl:CaCl), Polyethylene Glycol, cold (5 C) or unstressed. Shoots with leaves were collected at 0, 1, 4, and 8 hours for all treatments, and at 24 hours for all except cold. ****[PLEXdb (http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Elizabeth Tattersall. The equivalent experiment is VV1 at PLEXdb.]

2011-08-23 | GSE31594 | GEO

Grape skin transcriptome in the berries cultured in vitro treated with exogenous abscisic acid

Project description:The softened green berries of Cabernet Sauvignon were cultured in a Petri dish. 0.3M sucrose solution with (±)-abscisic acid (ABA) and without (±)-ABA (control) were applied to the Petri dishes. The berry skins were sampled at 3 and 10 days after the application. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Kazuya Koyama. The equivalent experiment is VV17 at PLEXdb. ABA treated - time: 3 days(2-replications); ABA treated - time: 10 days(2-replications); Non-treated (control) - time: 3 days(2-replications); Non-treated (control) - time: 10 days(2-replications)

2011-08-25 | E-GEOD-31662 | biostudies-arrayexpress

Gene expression associated with compatible viral diseases in berry

Project description:To understand the fruit changes and mechanisms involved in the compatible grapevine-virus interaction, we analyzed the berry transcriptome in two stages of development (veraison and ripening) in the red wine cultivar Cabernet Sauvignon infected with Grapevine leaf-roll-associated virus-3 (GLRaV-3). Analysis of global gene expression patterns indicate incomplete berry maturation in infected berries as compared to uninfected fruit suggesting viral infection interrupts the normal berry maturation process. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Andrea Vega. The equivalent experiment is VV28 at PLEXdb.

2011-08-26 | GSE31660 | GEO

Gene expression associated with compatible viral diseases in berry

2011-08-25 | E-GEOD-31660 | biostudies-arrayexpress