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FAIRE-seq in primary human megakaryocytes, erythroblasts and monocytes

ABSTRACT: Maps of open chromatin in three primary human blood cell types of the myeloid lineage (megakaryocytes, erythroblasts and monocytes) using the formaldehyde-assisted isolation of regulatory elements method followed by next-generation sequencing (FAIRE-seq). We also generated FAIRE-seq data in the megakaryocytic cell line CHRF-288-11. In addition to our data sets, we retrieved FAIRE-seq data for the erythroblastoid cell line K562 (ENCODE Project Consortium 2012) and pancreatic islets (Gaulton et al. 2010), and reanalyzed these data sets using the same methodology.

ORGANISM(S): Homo sapiens

PROVIDER: GSE37916 | GEO | 2013/04/08

SECONDARY ACCESSION(S): PRJNA165667

REPOSITORIES: GEO

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FAIRE-seq of the human megakaryocytic cell line CHRF-288-11

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