Genomics

Dataset Information

0

Small RNA variation between trifoliate and five-foliate shoot tips of Glycine max isolines


ABSTRACT: Two soybean isolines that differed in leaf phenotype were profiled by high throughput RNA and small RNA (sRNA) sequencing. A Clark isoline abbreviated as CF and homozygous for a dominant mutant allele, Lf1, that specifies a five-foliate compound leaf was compared to wild type Clark, designated CS, which is homozygous for the standard allele that produces trifoliate leaves. Although Lf1 is dominant, it presents variable expressivity as the young plantlets with the Lf1Lf1 genotype initially have trifoliate leaves in the first few weeks, after which they transition to five-foliate leaves. This study provides insight into the initial understanding of leaf development in soybean by revealing a number of small RNAs differentially expressed between the CS and CF. Out of over 200,000 unique sequences, 913 showed similarities to 122 known miRNAs in soybean.

ORGANISM(S): Glycine max

PROVIDER: GSE41199 | GEO | 2024/12/16

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2024-12-16 | GSE41200 | GEO
2006-08-23 | GSE5573 | GEO
2011-10-25 | E-GEOD-33155 | biostudies-arrayexpress
2011-10-25 | GSE33155 | GEO
2024-07-08 | GSE234864 | GEO
2010-05-13 | E-GEOD-21825 | biostudies-arrayexpress
2011-08-22 | E-GEOD-26208 | biostudies-arrayexpress
2012-04-03 | GSE29663 | GEO
2017-07-20 | GSE85714 | GEO
2022-01-10 | GSE164511 | GEO