Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression data from mouse protein iPS cells compared to mouse embryonic stem cells and mouse hepatocyte.

ABSTRACT: Increased genomic integrity an improved protein-based iPS cell method compared to current viral induced strategies We used microarrays to detail the global gene expression of protein-based iPS cells

ORGANISM(S): Mus musculus

PROVIDER: GSE53299 | GEO | 2014/03/08

SECONDARY ACCESSION(S): PRJNA231627

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Expression data from mouse protein iPS cells compared to mouse embryonic stem cells and mouse hepatocyte.

Project description:Increased genomic integrity an improved protein-based iPS cell method compared to current viral induced strategies We used microarrays to detail the global gene expression of protein-based iPS cells Total RNAs were prepared from mH, mES, miPS cells usingTRIzol reagent (Invitrogen, Carlsbad, CA) and their cDNAs were allowed to hybridize to Affymetrix Mouse Expression Array 430 containing over 43,000 mouse transcripts at the Harvard Partners Center for Genomics and Genetics.

2014-03-08 | E-GEOD-53299 | biostudies-arrayexpress

Expression data from mouse ES and iPS cells

2009-08-03 | GSE16925 | GEO

Expression data from mouse ES and iPS cells

2010-05-13 | GSE21515 | GEO

Transcription profiling of mouse ES and iPS cells

Project description:Induced pluripotent stem (iPS) cells were produced from reprogramming of somatic cells, and they are shown to possess pluripotent properties similar to embryonic stem (ES) cells. Here we used microarrays to detail the global expression pattern among the ES cells and iPS cells, as well as the original mouse embryo fibroblast (MEF), to identify important players involved in the reprogramming process. Experiment Overall Design: Mouse ES cell cultures, as well as selected iPS cell lines and the original MEF cells they were derived from, were used for RNA extraction and hybridization on Affymetrix microarrays. Three biological replicates for each sample were processed. GeneChips were processed and data were analyzed as previously described (Zeng et al., Dev Biol 20004).

2009-08-08 | E-GEOD-16925 | biostudies-arrayexpress

Expression data from mouse ES and iPS cells

Project description:Induced pluripotent stem (iPS) cells were produced from reprogramming of somatic cells, and they are shown to possess pluripotent properties similar to embryonic stem (ES) cells. Here we used microarrays to detail the global expression pattern among the ES cells and iPS cells, as well as the original mouse embryo fibroblast (MEF), to identify important players involved in the reprogramming process. Mouse ES cell cultures, as well as selected iPS cell lines and the original MEF cells they were derived from, were used for RNA extraction and hybridization on Affymetrix microarrays. Three biological replicates for each sample were processed. GeneChips were processed and data were analyzed using the RMA package of Bioconductor.

2010-05-28 | E-GEOD-21515 | biostudies-arrayexpress

Mouse ES cells vs. iPS cells

Project description:Transcriptional profiling of Mouse iPS cells and MEFs comparing ES cells.

2011-07-01 | GSE22327 | GEO

Proteomics of hepatocyte like cells differentiated from iPS cells

Project description:Proteomics and phosphoproteomics in hepatocyte like cells differentiated from iPS cells with gene mutation of V30M or Y114C.

2024-11-22 | PXD047155 | JPOST Repository

Mouse iPS cells-derived 3D-retinas

Project description:Mouse iPS cells-derived 3D-retinas

| PRJNA327746 | ENA

Rat iPS F65 cells' gene expression difference compared with that of the adult cells including rat BMC and PEF cells

Project description:Rat iPS F65 cells had different gene expression level compared with that of the adult cells including rat bone marrow cells(BMC) and rat primary ear fibroblasts(PEF). This difference gave rat iPS F65 cells unique characteristics which could then be compared with other species' ES cells or iPS cells like human ES cells and mouse ES cells by the homologue genes comparison to show which species' ES cells or iPS cells were more competitive with the other.

2009-04-01 | GSE13359 | GEO

Rat iPS M13 cells' gene expression difference compared with that of the adult cells including rat BMC and PEF cells

Project description:Rat iPS M13 cells had different gene expression level compared with that of the adult cells including rat bone marrow cells(BMC) and rat primary ear fibroblasts(PEF). This difference gave rat iPS M13 cells unique characteristics which could then be compared with other species' ES cells or iPS cells like human ES cells and mouse ES cells by the homologue genes comparison to show which species' ES cells or iPS cells were more competitive with the other.

2009-04-01 | GSE13360 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data