Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNAseq Replicate experiments from PD38 and PD79 IMR90s

ABSTRACT: RNAseq replicate in Proliferating and Senescent IMR90s

ORGANISM(S): Homo sapiens

PROVIDER: GSE53330 | GEO | 2014/12/15

SECONDARY ACCESSION(S): PRJNA231731

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Shared Molecules

Only show the datasets with similarity scores above: 0.5

Threshold

0.5

Similar Datasets

RNAseq Replicate experiments from PD38 and PD79 IMR90s

Project description:RNAseq replicate in Proliferating and Senescent IMR90s We used RNAseq to examine RNA levels in human IMR90 replicative senescence (RS)

2014-12-15 | E-GEOD-53330 | biostudies-arrayexpress

H3K9me3 ChIPseq experiments from PD IMR90s

Project description:H3K9me3 ChIPseq in Proliferating and Senescent IMR90s

2014-12-15 | GSE53329 | GEO

H3K9me3 ChIPseq experiments from PD IMR90s

Project description:H3K9me3 ChIPseq in Proliferating and Senescent IMR90s We used ChIP-seq to examine the global binding of H3K9me3 in human IMR90 replicative senescence (RS) and oncogene-induced (OIS)

2014-12-15 | E-GEOD-53329 | biostudies-arrayexpress

4DNESNTQV8XL - Replicate experiments of RNA-seq on RUES2

Project description:4DNESNTQV8XL - Replicate experiments of RNA-seq on RUES2

| PRJNA919042 | ENA

Transcriptomic profiling of myogenic newt A1 cells undergoing senescence induction, differentiation or serum and senescence-induced dedifferentiation

Project description:To investigate the molecular basis of senescence-induced dedifferentiation, we performed RNAseq on control proliferating cells (DMSO only) and etoposide-induced senescent cells to profile senescence induction. Additionally, we performed RNAseq on purified populations of differentiated myotubes derived from untreated A1 cells to investigate differentiation, as well as myotubes subsequently induced to dedifferentiate, either by serum exposure (10% FCS) or by exposure to 48 hour conditioned media from senescent cells (including proliferating cell conditioned media controls). We then performed gene expression profiling analysis using data obtained from RNA-seq of all 6 populations in triplicate.

2023-06-21 | GSE211798 | GEO

Replicate WGS

Project description:Quality assessment of replicate whole genome sequencing

| PRJEB42491 | ENA

Reproducibility of variant calls in replicate next generation sequencing experiments

Project description:In this study, we examined the reproducibility of nucleotide variant calls in replicate sequencing experiments of the same genomic DNA. We performed targeted sequencing of all known human protein kinase genes (kinome) (~3.3 Mb) using the SOLiD v4 platform. Seventeen breast cancer samples were sequenced in duplicate (n=14) or triplicate (n=3) to assess concordance of all calls and single nucleotide variant (SNV) calls.

| EGAS00001000826 | EGA

4DNESXR4J4MS - Replicate experiments of RNA-seq on RUES2 differentiated to mesoderm

Project description:4DNESXR4J4MS - Replicate experiments of RNA-seq on RUES2 differentiated to mesoderm

| PRJNA919046 | ENA

4DNES8R5RDVD - Replicate experiments of DNase Hi-C on RUES2 with DNaseI

Project description:4DNES8R5RDVD - Replicate experiments of DNase Hi-C on RUES2 with DNaseI

| PRJNA919044 | ENA

Replicative Senescence in Primary Fibroblasts

Project description:Senescent passage 26 fibroblasts compared to proliferating passage 8 fibroblasts Keywords: Senescent vs. Proliferating

2007-01-24 | GSE6762 | GEO