Transcriptomics

Dataset Information

0

Spatially heterogeneous choroid plexus transcriptomes encode positional identity and contribute to regional cerebrospinal fluid production


ABSTRACT: A sheet of choroid plexus epithelial cells extends into each cerebral ventricle and secretes signaling factors into the cerebrospinal fluid (CSF). To evaluate whether differences in the CSF proteome across ventricles arise, in part, from regional differences in choroid plexus gene expression, we defined the transcriptome of lateral ventricle (telencephalic) vs. fourth ventricle (hindbrain) choroid plexus. We find that positional identities of mouse, macaque, and human choroid plexi derive from gene expression domains that parallel their axial tissues of origin. We then show that molecular heterogeneity between telencephalic and hindbrain choroid plexi contributes to region-specific, age-dependent protein secretion in vitro. Transcriptome analysis of FACS-purified choroid plexus epithelial cells also predicts their cell type-specific secretome. Spatial domains with distinct protein expression profiles were observed within each choroid plexus. We propose that regional differences between choroid plexi contribute to dynamic signaling gradients across the mammalian cerebroventricular system.

ORGANISM(S): Mus musculus

PROVIDER: GSE66312 | GEO | 2015/03/25

SECONDARY ACCESSION(S): PRJNA276481

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2016-07-20 | E-GEOD-82308 | biostudies-arrayexpress
2012-04-08 | E-GEOD-37098 | biostudies-arrayexpress
2023-07-03 | GSE228458 | GEO
2023-07-03 | GSE228314 | GEO
2024-05-06 | GSE246851 | GEO
2012-04-09 | GSE37098 | GEO
2021-04-07 | GSE168704 | GEO
2022-12-18 | PXD031862 | Pride
2013-02-05 | E-GEOD-27630 | biostudies-arrayexpress
2019-01-14 | PXD011918 | Pride