Transcriptomics

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Functional characterization of inflammatory bowel disease-associated gut dysbiosis in gnotobiotic mice


ABSTRACT: Gut dysbiosis is closely involved in the pathogenesis of inflammatory bowel disease (IBD). However, it remains unclear whether IBD-associated gut dysbiosis plays a primary role in disease manifestation or is merely secondary to intestinal inflammation. Here, we established a humanized gnotobiotic (hGB) mouse system to assess the functional role of gut dysbiosis associated with two types of IBD - Crohn's disease (CD) and ulcerative colitis (UC). In order to explore the functional impact of dysbiotic microbiota in IBD patients on host immune responses, we analyzed gene expression profiles in colonic mucosa of hGB mice colonized with healty (HC), CD, and UC microbiota.

ORGANISM(S): Mus musculus

PROVIDER: GSE73882 | GEO | 2015/10/10

SECONDARY ACCESSION(S): PRJNA298311

REPOSITORIES: GEO

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