Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS_Cyanobacteria_PCC_Strains

ABSTRACT: Metabolomics data from cyanobacterial strains from the Pasteur Culture Collection, France

INSTRUMENT(S): Synapt G2-S MS

ORGANISM(S): Cyanobacteria (ncbitaxon:1117)

SUBMITTER: Muriel Gugger

PROVIDER: MSV000084954 | GNPS | Thu Feb 13 03:50:00 GMT 2020

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Project description:Non-axenic cyanobacterial cultures from Berthold Laughinghouse Culture Collection (BLCC).

| PRJNA1156782 | ENA

Project description:Biogeography of cyanobacterial consortia from the culture collection of microorganisms from extreme environments

| PRJNA401502 | ENA

National Collection of Yeast Cultures genomic strain data [Assembly]

Project description:Sequence data for 230 National Collection of Yeast Culture (Norwich, U.K.) Saccharomyces cerevisiae strains

| PRJEB57445 | ENA

New genetic biomarkers to differentiate pathogenic and clinically relevant Bacillus cereus strains

Project description:Bacillus cereus is the second leading cause of collective food poisoning in France. B. cereus is also associated with severe clinical infections leading to patient death in 10% of the cases. The emergence of B. cereus as a foodborne and opportunistic pathogen has intensified the need to distinguish strains of public health concern. In this work, by performing a screen on a large collection of B. cereus strains of varying pathogenic potential, we identified genetic determinants capable of discriminating B. cereus strains inducing negative clinical outcomes. The combination of 4 biomarkers is sufficient to accurately discern clinical strains from harmless strains. Three of the biomarkers are located on the chromosome, with a fourth one identifying a plasmid carried by most pathogenic strains. A 50 kbp region of this plasmid promotes the virulence potential of these strains and could thus be defined as a new pathogenicity island of B. cereus. These new findings help in the understanding of B. cereus pathogenic potential and complexity and may provide tools for a better assessment of the risks associated with B. cereus contamination to improve patient health and food safety.

2022-01-12 | GSE171128 | GEO

Lj-SPHERE (16S rRNA amplicon data)

Project description:Lotus japonicus culture collection (16S rRNA amplicon data)

| PRJEB37695 | ENA

IPPAS cyanobacterial genomes sequencing

Project description:Cyanobacterial genomes of the IPPAS microalgae collection

| PRJEB86070 | ENA

Orthogonal degron system for controlled protein degradation in cyanobacteria

Project description:We installed and optimized a genetic tool that allows control over protein stability in a model cyanobacterium. This tool has potential uses for the fundamental study of cyanobacterial genes, and may be useful for the design of more sophisticated, bioindustrial cyanobacterial strains.

2021-06-30 | PXD023591 | Pride

NBC_Collection_Pekiskomycin_Producers

Project description:Metabolomics data from 3 strains in the NBC collection that carry a Pekiskomycin BGC. The strains were grown in R5 media and represent a WT strain, strain with a StrR regulator or LmbU regulator heterologously expressed to activate the cluster. Streptomyces sp. NBC_00654 (NCBI:txid2975799) Streptomyces sp. NBC_00878 (NCBI:txid2975854)

2025-03-17 | MSV000097346 | MassIVE

GNPS_Cyanobacteria_UHCC_Strains

Project description:Metabolomics dataset from UHCC cyanobacterial strains

2020-02-12 | MSV000084950 | GNPS