Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS Top-down venomics of 12 turkish viper species

ABSTRACT: Top-down venom proteome analysis of reduced (TCEP) and native venom samples from twelve turkish viper species.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Vipera (ncbitaxon:8703)

SUBMITTER: Daniel Petras

PROVIDER: MSV000089193 | GNPS | Mon Apr 04 10:43:00 BST 2022

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Top-down venomics of 12 turkish viper species

Project description:Top-down venom proteome analysis of reduced (TCEP) and native venom samples from twelve turkish viper species.

2022-04-04 | MSV000089193 | MassIVE

Top-down Proteomics of Venom from Naja haje from the Berlin Zoo

Project description:Top-down Proteomics of Venom from Naja haje from the Berlin Zoo. 4 technical replicates from TCEP reduced crude venom and 1 replicate from native venom.

2021-04-10 | MSV000087173 | MassIVE

Top-Down Proteomics of Malayan Pitviper Venom

Project description:LC-MS/MS based Top-Down Proteomics of reduced and native venom from juvenile and adult Malayan Pitviper specimens.

2024-05-09 | MSV000094730 | MassIVE

Top-Down and Bottom-Up Proteomics Strategies for Characterization of Brazilian Pampa Snake, Bothrops pubescens, venom.

Project description:The genus Bothrops is responsible for most part of envenomation accidents in Brazil. Bothrops pubescens is an endemic and neglected species in the Brazilian Pampa Biome. The characterization of its venom is essential since there is no data about it and can be helpful in the discovery of active biomolecules and for a better understanding of its action. We used top-down (TDP), native top-down, and bottom-up proteomic (BUP) approaches to characterize the venom of B. pubescens. We were able to identify 89 protein groups with the BUP approach and 40 unique proteoforms with the TDP approach, demonstrating the similarities and peculiarities of B. pubescens venom. We also identified a dimeric L-amino acid oxidase with using native TDP. Here we present for the first time a bothropic venom characterization through TDP approaches.

2024-01-26 | PXD027650 | Pride

Top-down Proteomics of Venom Gland Organoids

Project description:Top-down proteomics of venom protein of venom-gland organoids aspidelaps. Samples were extracted with MilliQ water and proteins reduced with TCEP before top-down LC-MS/MS analysis.

2024-03-07 | MSV000094268 | MassIVE

Top-down Proteomics of Venom Gland Organoids II

2024-03-07 | MSV000094269 | MassIVE

GNPS - Micrurus Top-down Venom Proteomics

Project description:Top-down venom proteomics analysis of venom from different coral snake (Micrurus) spcies from Costa Rica.

2019-05-06 | MSV000083749 | GNPS

Top-down venomics of the East African green mamba and the black mamba

Project description:Top-down MS analysis of reduced venom from black and green mambas.

2016-03-24 | MSV000079607 | MassIVE

Top-down venomics Mapping proteoforms and protein complexes from king cobra venom

Project description:Characterization of King cobra venom by denaturing and native top-down proteomics.

2015-10-18 | MSV000079351 | MassIVE

Top-down venom proteomics of Walterinnesia aegyptia and Walterinnesia morgani

Project description:Venom proteomics analysis of Walterinnesia aegyptia and Walterinnesia morgani. For top-down analysis, venom samples were reduced with TCEP and measured via HPLC-MS/MS (Q-Exactive and LTQ-Orbitrap XL).

2021-01-15 | MSV000086709 | MassIVE

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data