Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS - Anti-inflammatory compounds in probiotic yeast revealed by untargeted metabolomics

ABSTRACT: Exo-metabolomes of S. cerevisiae and S. cerevisiae var. boulardii at 30 or 37 degrees.

INSTRUMENT(S): compact

ORGANISM(S): Saccharomyces Sp. 'boulardii' (ncbitaxon:252598) Saccharomyces Cerevisiae (ncbitaxon:4932)

SUBMITTER: Cynthia Vesterager

PROVIDER: MSV000090159 | GNPS | Fri Aug 19 02:21:00 BST 2022

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Anti-inflammatory compounds in probiotic yeast revealed by untargeted metabolomics

Project description:Exo-metabolomes of S. cerevisiae and S. cerevisiae var. boulardii at 30 or 37 degrees.

2022-08-19 | MSV000090159 | MassIVE

Yeast AlaRS mutants

Project description:RNA sequencing of Saccharomyces cerevisiae wild type and alanyl-tRNA synthetase mutants grown at 30 degrees and challenged at 37 degrees

2021-06-23 | GSE178694 | GEO

Anti-inflammatory compounds in SCI

Project description:A screen of 5 anti-inflammatory compounds for their effects in explanted, cultured rat spinal cord slices. All injured (explanted) cords are cultured for 4 hrs.

2010-06-05 | E-GEOD-633 | biostudies-arrayexpress

Yeast linker histone HHO1p effect on transcription before and after heat shock

Project description:DNA array expression analysis comparing RNA transcripts in wild type and hho1 strains before and after a heat-shock from 25 to 37 degrees. Keywords: expression, heat shock

2008-07-01 | GSE9095 | GEO

Anti-inflammatory compounds in SCI

Project description:A screen of 5 anti-inflammatory compounds for their effects in explanted, cultured rat spinal cord slices. All injured (explanted) cords are cultured for 4 hrs. Keywords: ordered

2003-10-03 | GSE633 | GEO

CRAC of yeast RNA polymerase II in various thermosensitive strains at permissive and non-permissive temperature and anchor-away strains with the addition of rapamycin.

Project description:We obtained RNA polymerase II occupancy profile across the genome of S.cerevisiae in several strains, Wild type at 25 and 37 degrees C, RNA15-1 at 25 and 37 degrees C, anchor-away parental strain plus rapamycin, Reb1 anchor-away plus rapamycin, Rap1 anchor-away plus rapamycin, Nrd1-AID plus auxin, and nrd1-AID without auxin. This allowed us to compare polymerase profiles when these proteins are depleted from the nucleus.

2018-01-10 | GSE97913 | GEO

The comparison of gene expression profiles in hepatic stellate cells isolated from mouse livers by perfusion method at 37 degrees or 6 degrees

Project description:We compared transcriptome profiling (bulk RNA-seq) of hepatic stellate cells isolated from mouse livers by perfusion method using collagenase at 37 degrees or 6 degrees and evaluated the heat-stressed gene expression at 37 degrees.

2022-09-28 | GSE192598 | GEO

Anti-inflammatory effect of grape proanthocyandins (PAC) in vitro.

Project description:PAC polymers of different degrees of polymerization (DP) were used to stimulate murine RAW macrophages.

2021-02-19 | GSE167063 | GEO

PGPR isolated from the rhizosphere of a wheat ancestor and active in an elite cultivar: metabolomics and proteomics of bacterial exudates affecting root development

Project description:Two diazotrophic bacteria, BPMP-PU-28 and BPMP-EL-40, isolated from the rhizosphere of a wild wheat ancestor (T. t. dicoccoides) grown in soil from its refuge area in the Fertile Crescent or from south of France, respectively, were shown to behave as efficient Plant Growth Promoting Rhizobacteria (PGPR) upon interaction with an elite wheat cultivar (Anvergur), providing about 50% of the seed nitrogen content in plants grown under low assimilable nitrogen availability. A bacterial growth medium was developed to investigate the effects of bacterial exudates on root development in the elite cultivar and to analyze the exo-metabolomes and exo-proteomes of the two strains. Altered root development was observed, with distinctive responses according to the strain, BPMP-PU-28 also inducing a strong increase in root hair length and density. Exo-metabolome analysis revealed a complex set of secondary metabolites including fatty acids potentially involved in volatile organic compounds (VOCs) metabolism, cyclopeptides that could act as phytohomone mimetics, quorum sensing molecules having inter-kingdom signaling properties and nutrient ion chelators. The exo-proteome comprised a set of strain specific enzymatic activities (e.g., proteases) and structural proteins belonging to outer-membrane vesicles likely to sequester metabolites, peptides and enzymes in their lumen. Thus, the wheat ability to establish efficient beneficial interactions with PGPR has not been profoundly reprogrammed during domestication and breeding, and PGPR constitutively exude rich and complex metabolomes and proteomes, in absence of partner roots, which could allow numerous mechanisms to simultaneously contribute to plant growth promotion and thereby broaden the range of responsive plant species.

2023-03-08 | PXD034914 | Pride

Transcription profiling of yeast subjected to different concentrations of caesium chloride salt

Project description:S. cerevisiae BY4741 (Mata; His3Delta1; leuDelta0; lys2Delta0; ura3Delta0) was grown in YPD at 30 degrees C with aeration to exponential growth phase and was subjected to a different concentrations of Caesium Chloride salt: 0mM, 30mM, 50mM, 100mM, 150mM, 200mM and 250mM 20 minutes at 30 degrees C.

2007-11-01 | E-MEXP-1292 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data