Proteomics

Dataset Information

0

Total proteome Dry seed Col-0, dwa1 dwa2, YFP:AFP2 (+/-) and YFP:AFP2 in dwa1 dwa2 Background

ABSTRACT: we performed a label-free quantitative mass spectrometry-based proteomic analysis comparing the dry seed proteome of four genotypes in three independent biological replicates: Col-0, dwa1 dwa2 double mutant, and YFP-AFP2 over expressing lines in both Col-0 and dwa1 dwa2 backgrounds. This assay aimed to identified protein accumulation pattern correlating with seed longevity and or ABA resistance during germination.

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

SUBMITTER: Guillaume Née 

PROVIDER: PXD030589 | JPOST Repository | Wed Dec 21 00:00:00 GMT 2022

REPOSITORIES: jPOST

Json Xml

Dataset's files

Source:
Action DRS
191017_C19_034_QHF1_Standard_Rev02_%2319_045_GNE106.raw Raw
191017_C19_034_QHF1_Standard_Rev02_%2319_045_GNE107.raw Raw
191017_C19_034_QHF1_Standard_Rev02_%2319_045_GNE108.raw Raw
191017_C19_034_QHF1_Standard_Rev02_%2319_045_GNE109.raw Raw
191017_C19_034_QHF1_Standard_Rev02_%2319_045_GNE110.raw Raw
Items per page:
1 - 5 of 20
altmetric image

Publications

ABI5 binding protein2 inhibits ABA responses during germination without ABA-INSENSITIVE5 degradation.

Lynch Tim T   Née Guillaume G   Chu Avan A   Krüger Thorben T   Finkemeier Iris I   Finkelstein Ruth R RR  

Plant physiology 20220601 2

Overexpression of ABA-INSENSITIVE5 binding proteins (AFPs) results in extreme ABA resistance of seeds and failure to acquire desiccation tolerance, at least in part through effects on chromatin modification. We tested the hypothesis that AFPs promote germination in Arabidopsis (Arabidopsis thaliana) by also functioning as adapters for E3 ligases that ubiquitinate ABI5, leading to its degradation. Interactions between AFPs and two well-characterized classes of E3 ligases targeting ABI5, DWD HYPER  ...[more]

Similar Datasets

Transcriptomics Role for ABCI20 in regulating seed maturation
2018-09-01 | GSE76904 | GEO
Transcriptomics Total RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0 in Arabidopsis [msh1_graft_leaf_RNA-seq]
2020-09-20 | GSE152565 | GEO
Metabolomics Nontargeted and targeted metabolomics measurements of abiotic stress responses in three-week-old Arabidopsis thaliana plants' rosette leaf tissue
2017-07-17 | MTBLS355 | MetaboLights
Proteomics Targeted Quantification of SnRK2.6 Activation Loop Phosphorylation Status at Positions 171 and 175/176 in NIL-DOG1 and dog1-1 Dry Seeds.
2024-06-27 | PXD053457 | JPOST Repository
Methylation profiling Bisulfite (methylome) sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0; msh1 mutant; dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_BS-seq]
2020-09-20 | GSE152564 | GEO
Transcriptomics Iron-deficiency-induced changes in wild type, ubc13A and cucumber CsUBC13 overexpressed Arabidopsis roots
2009-07-07 | GSE16964 | GEO
Transcriptomics RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_root_RNA-seq]
2020-09-20 | GSE152566 | GEO
Transcriptomics Translational dynamics during seed maturation
2019-09-28 | GSE127509 | GEO
Transcriptomics Comparison of histone deacetylase 9-1 mutant (SALK_001723) dry seed transcriptome with Col wild-type
2014-09-21 | GSE50786 | GEO
Transcriptomics Profiling of total and AGO1-associated small RNAs in Col-0 wild type, rns2-2 and rns2-3 flowers
2020-01-01 | E-MTAB-8493 | biostudies-arrayexpress