Alerasool_Transcription_Activators_P77_VS17_APMS

ABSTRACT: This dataset consists of 57 raw MS files and associated peak lists and result files, acquired on a TripleTOF 5600 mass spectrometer operated in Data Dependent Acquisition mode. DDA files were searched through Mascot and Comet, and this deposition lists the identification and SAINT scoring using iProphet. The files are associated with a manuscript submitted for publication by Alerasool et al. that determines the protein-protein and proximity interaction landscape of a subset of transcription factors. Two separate MassIVE submissions are associated with this dataset, one for the BioID dataset and this one for the AP-MS data. Contributors Samples were generated by Nader Alerasool and affinity purification and mass spectrometry was performed by Zhen-Yuan Lin with oversight from Brett Larsen and Anne-Claude Gingras. Analysis was performed by Anne-Claude Gingras, Mikko Taipale and Benjamin L. Piette. Corresponding author: Mikko Taipale ([e-mail]). Anne-Claude Gingras ([e-mail]) should be contacted for questions on this dataset Supplementary files and tracking information This submission is associated with 3 Supplementary Files (in addition to this README file) Table 1 describes the composition of this dataset Table 2 lists all the peptide identification evidence (as per iProphet) Table 3 lists the SAINTexpress interactions Internal reference from the Gingras lab ProHits implementation: Project: P77, Export version: VS17 SAINT Task ID: 5216

INSTRUMENT(S): TripleTOF 5600

ORGANISM(S): Human Adenovirus 5 (ncbitaxon:28285) Homo Sapiens (ncbitaxon:9606)

SUBMITTER: Anne-Claude Gingras  

PROVIDER: MSV000087413 | MassIVE | Wed May 12 18:28:00 BST 2021

SECONDARY ACCESSION(S): PXD025988

REPOSITORIES: MassIVE