Proteomics

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PyProteinInference: Configurable Protein Inference Analysis of Tandem Mass Spectrometry Data


ABSTRACT: PyProteinInference provides a comprehensive suite of tools to guide researchers through the application of multiple protein inference algorithms and computation of protein-level, set-based false discovery rates (FDR) from tandem mass spectrometry (MS/MS) data using a single interface. Here, we use a benchmark K562 whole cell lysate to demonstrate that PyProteinInference is a reliable, easy-to-use inference tool that simplifies the often-difficult process of inferring protein identities from MS/MS data.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

SUBMITTER: Corey Bakalarski  

PROVIDER: MSV000089698 | MassIVE | Tue Jun 21 18:12:00 BST 2022

REPOSITORIES: MassIVE

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