Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome Sequences of New Pandoravirus Strains, Isolated from Brazil and the South of France.

ABSTRACT: Pandoravirus aubagnensis was isolated from freshwater collected from “Manon des Sources” in Marseille city,France. By co-culture on Acanthamoeba castellanii. Pandoravirus belohorizontensis was isolated from soil samples collected from Belo Horizonte city in Brazil, by co-culture on Acanthamoeba castellanii.

PROVIDER: PRJEB42645 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of Acanthamoeba polyphaga mimivirus infecting Acanthamoeba castellanii for different lengths of time

Project description:A culture of Acanthamoeba castellanii cells was infected with mimivirus. At specified times after infection, infected cells aliquots were subjected to total RNA extraction. Cy3 labeled cDNA was hybridized on custom designed Agilent oligonucleotide tiling microarrays covering both strands of the mimivirus genome.

2010-03-18 | E-MTAB-187 | biostudies-arrayexpress

Transcriptome of Salmonella within Acanthamoeba

Project description:Here, we report global gene expression of S. enterica serovar Typhimurium within Acanthamoeba castellanii by Cappable-Seq

2021-05-01 | GSE173638 | GEO

Acanthamoeba castellanii strain:Neff

Project description:Acanthamoeba castellanii

| PRJNA20303 | ENA

Project description:Co-evolution of Pseudomonas aeruginosa with Acanthamoeba castellanii

| PRJNA607392 | ENA

Strand specific sequencing illustrates the complex transcriptional response of Legionella pneumophila during infection

Project description:Legionella pneumophila is a Gram-negative facultative intracellular human pathogen with a distinct biphasic lifestyle. One of its primary environmental hosts in the free-living amoeba Acanthamoeba castellanii and its infection by L. pneumophila mimics that seen in human macrophages. Here we present analysis of strand specific sequencing of the transcriptional response of L. pneumophila in broth growth and in infection of A. castellanii. Examination of 2 infection and 3 broth growth time points

2011-02-11 | E-GEOD-27232 | biostudies-arrayexpress

Strand specific sequencing illustrates the complex transcriptional response of Legionella pneumophila during infection

2011-02-11 | GSE27232 | GEO

Molecular mechanisms of increased survival of Vibrio cholerae flrA mutant in amoeba

Project description:Mutation in flagellar transcriptional regulatory gene (flrA) result in increased V. cholerae growth and intracellular survival in the amoeba host Acanthamoeba castellanii. To identify molecular mechanisms behind the increased survival and growth of the flrA mutant transcriptomics assay was done.

2023-09-29 | GSE215287 | GEO

Comprehensive Characterization of Extracellular Vesicles by Environmental (Neff) and Clinical (T4) Strains of Acanthamoeba castellanii

Project description:Proteomics, lipidomics, and metabolomics analysis of extracellular vesicles secreted by an environmental strain and a clinical strain of Acanthamoeba castellanii.

2024-04-05 | MSV000094477 | MassIVE

Acanthamoeba castellanii

Project description:RNAseq data from Acanthamoeba castellanii

| PRJNA794325 | ENA

Project description:Acanthamoeba castellanii strain Namur genome

| PRJEB38202 | ENA