Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil metagenome

ABSTRACT: Impacts of DNA extraction method and PCR variability on metabarcoding estimates of soil biodiversity

PROVIDER: PRJNA472204 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7204980_1.fastq.gz	Fastqsanger.gz
	SRR7204980_2.fastq.gz	Fastqsanger.gz
	SRR7204990_1.fastq.gz	Fastqsanger.gz
	SRR7204990_2.fastq.gz	Fastqsanger.gz
	SRR7205000_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 160

Similar Datasets

uncultured protist

Project description:DNA extraction impacts on soil protist

| PRJNA342616 | ENA

human gut metagenome

Project description:Method assessment of fecal DNA extraction

| PRJDB6503 | ENA

DNA Extraction

Project description:DNA extraction method targeted loci environmental

| PRJNA315949 | ENA

Project description:Monitoring earthworm biodiversity using DNA metabarcoding

| PRJNA783879 | ENA

Project description:DNA metabarcoding from sample fixative as a quick and voucher-preserving biodiversity assessment method

| PRJNA504612 | ENA

Clinical Study of Pan-cancer DNA Methylation Test in Plasma

Project description:We intend to establish an efficient method for plasma cfDNA extraction and Bisulfite transformation to facilitate the detection of DNA methylation status using multiplex fluorescence PCR. Meanwhile, we expect to identify several plasma methylation markers that can be highly sensitive for multi-cancer detection. Finally, we will provide a pan-cancer blood test that is easy to operate, low cost, accurate and easy to promote.

| 5068 | ecrin-mdr-crc

soil metagenome

Project description:soil samples - DNA extraction

| PRJNA354227 | ENA

Soil metaproteomics using DNA RNA protein co-extraction method

Project description:Soil is an inherently complex matrix and as such, we believe when performing culture-independent microbial community analyses using the 'omics' suite of tools, all biomolecules investigated should be co-extracted from the same biological sample. To this end, we developed a robust, cost-effective DNA, RNA and protein co-extraction method for soil. The samples deposited here represent 3 biological replicates from one of eight soil types tested in this work.

2019-07-15 | PXD007077 | Pride

Project description:Revisiting the effect of PCR replication and sequencing depth on biodiversity metrics in environmental DNA metabarcoding

| PRJNA719103 | ENA

Human Stool Sample

Project description:DNA Extraction Method Comparatives For Human Stool Based Microbiome

| PRJNA693434 | ENA