Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

LRP peptide pulldowns - LRP-1 peptide, 4467-4481 as bait, in solution digests

ABSTRACT: LRP-1 peptide, 4467-4481 as bait, in solution digests

INSTRUMENT(S): instrument model, QSTAR Pulsar, QSTAR

ORGANISM(S): Rattus Norvegicus (rat)

SUBMITTER: Miklos Guttman

PROVIDER: PRD000143 | Pride | 2009-12-01

REPOSITORIES: Pride

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	PRIDE_Exp_Complete_Ac_9944.pride.mgf.gz	Mgf
	PRIDE_Exp_Complete_Ac_9944.pride.mztab.gz	Mztab
	PRIDE_Exp_Complete_Ac_9944.xml.gz	Xml
	PRIDE_Exp_Complete_Ac_9945.pride.mgf.gz	Mgf
	PRIDE_Exp_Complete_Ac_9945.pride.mztab.gz	Mztab

Items per page:

1 - 5 of 18

Similar Datasets

Fermented Seed solution

Project description:Fermented Seed solution Raw sequence reads

| PRJNA1014181 | ENA

Determining the wash solution to use

Project description:We tested a new wash solution from Agilent Keywords: Agilent microarray, pooling, Drosophila, intact adults

2007-06-18 | GSE5182 | GEO

dissolved black carbon solution

Project description:dissolved black carbon solution Genome sequencing and assembly

| PRJNA813032 | ENA

In vitro fermentation solution

Project description:In vitro fermentation solution Genome sequencing and assembly

| PRJNA987521 | ENA

Single-cell RNA-seq of human tumor digests treated with Toll-like receptor agonists and interferons against untreated controls

Project description:To test whether dendritic cells from patient-derived tumor digests can be activated by agonists and which genes are regulated, we performed a single-cell RNA-seq of immune cells (CD45+) from 4 donors.

2022-06-15 | E-MTAB-11734 | biostudies-arrayexpress

Bait-capture based single molecule footprinting on ES cells and derivatives

Project description:Bait-capture based Single Molecule Footprinting (SMF) data from Sonmezer et al., 2020. SMF data is obtained by treating isolated nuclei with methyltransferases, where binding of proteins on DNA, e.g. nucleosomes and TFs, leave behind unmethylated cytosines as footprints. Data in this experiment comprises SMF data obtained from ES, DNMT-TKO, and neural progenitor (NP) cells. These data were generated by employing Agilent Sure-Select Mouse Methyl-Seq kit, enriching the sample for regulatory regions of mouse genome prior to library preparation. Thus, these data contain high coverage accessibility information at regulatory loci in different cell types.

2021-05-04 | E-MTAB-9123 | biostudies-arrayexpress

Lianzhifan solution: a traditional Chinese medicine

Project description:Lianzhifan solution: a traditional Chinese medicine Raw sequence reads

| PRJNA556807 | ENA

Bait-capture based single molecule footprinting of different mouse cell lines

Project description:Bait-capture based Single Molecule Footprinting (SMF) data from Kreibich et al., 2022. SMF data is obtained by treating extracted nuclei with a GpC methyltransferase, where binding of proteins on DNA, e.g. nucleosomes and transcription factors (TFs), leave behind unmethylated GpCs as footprints. Data in this experiment comprises SMF data obtained from WT embryonic stem cells (ES), DNMT TKO ES, TET TKO ES, F1 hybrid ES (129/CAST), neural progenitor (NP),�myoblast (C2C12) and�murine erythroleukemia (MEL)�cells. These data were generated by employing Agilent Sure-Select Mouse Methyl-Seq kit, enriching the sample for cis-regulatory regions of the mouse genome prior to library preparation. Thus, these data contain high coverage accessibility information at regulatory loci in different cell types. The SMF procedure maintains the endogenous DNA methtylation in CpG context, allowing the simultaneous detection of chromatin accessibility, TF binding and endogenous DNA methylation.

2023-02-06 | E-MTAB-11700 | biostudies-arrayexpress

In solution target enrichment for ancient DNA

Project description:Experimental conditions improving in solution target enrichment for ancient DNA

| PRJEB13983 | ENA

Bait-capture based single molecule footprinting of different mouse cell lines

Project description:Bait-capture based single molecule footprinting of different mouse cell lines

| PRJEB52495 | ENA