Ontology highlight
ABSTRACT:
REANALYSED by: PAe005197
OTHER RELATED OMICS DATASETS IN: MSV000080255PRJNA215765MSV000080256MSV000080254PAe005194PAe005189PAe005197
INSTRUMENT(S): Q Exactive
ORGANISM(S): Homo Sapiens (human)
TISSUE(S): Liver, Permanent Cell Line Cell
SUBMITTER: Zhang Chengpu Zhang Chengpu
LAB HEAD: Zhang Chengpu Zhang Chengpu
PROVIDER: PXD000533 | Pride | 2013-12-16
REPOSITORIES: Pride
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Journal of proteome research 20131211 1
We upgraded the preliminary CCPD 1.0 to CCPD 2.0 using the latest deep-profiling proteome (CCPD 2013) of three hepatocellular carcinoma (HCC) cell lines, namely, Hep3B, MHCC97H, and HCCLM3 (ProteomeXchange identifiers: PXD000529, PXD000533, and PXD000535). CCPD 2.0 totally covered 63.6% (438/689) of Chr. 8-coded proteins and 62.6% (439/701) of Chr. 8-coded protein-coding genes. Interestingly, we found that the missing proteins exhibited a tendency to form a cluster region in chromosomes, such as ...[more]