Proteomics

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Proteomics of Fuchs Endothelial Corneal Dystrophy support that the extracellular matrix of Descemet¹s membrane is Disordered


ABSTRACT: Fuchs’ endothelial corneal dystrophy is major corneal disorder in the western world affecting the innermost part of the cornea, which leads to visual impairment. The morphological changes observed in Fuchs’ endothelial corneal dystrophy is well described, however, much less in known of the pathology at the molecular level. As the morphological changes observed in the cornea is profound in the extracellular matrix we sought to determine in protein profiles and changes herein in the Descement’s membrane and endothelium layer of Fuchs’ endothelial conrneal dystrophy patients when compared to healthy control tissue. Using the extracted ion chromatogram label-free MS based quantification method we quantified approximately the 50 most abundant proteins of the Descemet’s membrane and endothelial layer in in patient and control tissue. In addition, using the isobaric tag for relative and absolute quantification MS method resulted in a total of 22 regulated proteins of which the majority were extracellular proteins known to be involved in proper assembly and modulation of the basement membrane in other tissues. Many of the regulated proteins were furthermore among the most abundant proteins quantified. The two MS methods performed here suggest altered arrangement of the extracellular matrix in Fuchs’ endothelial corneal dystrophy and provide new candidate proteins that may be involved in molecular mechanism of this disease.

INSTRUMENT(S): TripleTOF 5600

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cornea, Corneal Endothelial Cell

DISEASE(S): Fuchs' Endothelial Dystrophy

SUBMITTER: Ebbe Toftgaard Poulsen  

LAB HEAD: Jan Johannes Enghild

PROVIDER: PXD000746 | Pride | 2014-05-27

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
120615_ETP_Fuchs_1_1.dat Other
120615_ETP_Fuchs_1_1.dat-pride.pride.mgf.gz Mgf
120615_ETP_Fuchs_1_1.dat-pride.pride.mztab.gz Mztab
120615_ETP_Fuchs_1_1.dat-pride.xml.gz Xml
120615_ETP_Fuchs_1_1.mgf Mgf
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Publications

Proteomics of Fuchs' endothelial corneal dystrophy support that the extracellular matrix of Descemet's membrane is disordered.

Poulsen Ebbe Toftgaard ET   Dyrlund Thomas F TF   Runager Kasper K   Scavenius Carsten C   Krogager Toke Peter TP   Højrup Peter P   Thøgersen Ida B IB   Sanggaard Kristian W KW   Vorum Henrik H   Hjortdal Jesper J   Enghild Jan J JJ  

Journal of proteome research 20140627 11


Fuchs' endothelial corneal dystrophy (FECD) is a major corneal disorder affecting the innermost part of the cornea, leading to visual impairment. As the morphological changes in FECD are mainly observed in the extracellular matrix of the Descemet's membrane/endothelial layer, we determined the protein profiles of diseased and control tissues using two relative quantitation MS methods. The first quantitation method, based on the areas of the extracted ion chromatograms, quantified the 51 and 48 m  ...[more]

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