Proteomics

Dataset Information

0

EV71 proteomics - Analysis of EV71 infection progression using triple-SILAC-based proteomics approach


ABSTRACT: Enterovirus 71 (EV71), a member of Picornaviridae, causes severe neurological and systemic illness in children. To better understand the virus-host cell interactions, we performed a triple-SILAC-based quantitative proteomics study monitoring host cell proteome changes after EV71 infection. Based on the quantitative data for more than 4100 proteins, ~17% of the proteins were found as significantly changed (p<0.01) at either 8 or 20 hours post infection (h.p.i.). Five biological processes and seven protein classes showed significant differences. Functional screening of 9 regulated proteins discovered the regulatory role of CHCH2, a mitochondrial protein known as a transcriptional activator for cytochrome c oxidase (COX), in EV71 replication. Further studies showed that CHCH2 served as a negative regulator of innate immune responses.

INSTRUMENT(S): TripleTOF 5600

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Haoyu Li  

LAB HEAD: Lin Guo

PROVIDER: PXD002483 | Pride | 2015-08-31

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20140323_VA1-5.xml.gz Xml
20140323_VA1.wiff Wiff
20140323_VA1.wiff.scan Wiff
20140323_VA2.wiff Wiff
20140323_VA2.wiff.scan Wiff
Items per page:
1 - 5 of 33
altmetric image

Publications

The predictive value of cumulative lactate dehydrogenase release within the first 72 h of acute myocardial infarction in patients treated with primary angioplasty.

Elsman Peter P   Zijlstra Felix F   Miedema Kor K   Hoorntje Jan C A JC   Dikkeschei Lambert D LD   Slingerland Robbert J RJ   Reiffers Stoffer S   de Boer Menko-Jan MJ   Suryapranata Harry H  

Annals of clinical biochemistry 20040301 Pt 2


<h4>Background</h4>In patients with acute myocardial infarction, estimation of infarct size by cumulative lactate dehydrogenase release at 72 h (LDHQ(72)) is a simple and widely used method. Our objective was to study the value of estimating infarct size, by the cumulative release of LDH over 72, 60, 48 and 36 h in predicting left ventricular ejection fraction (LV(ef)) and cardiac death at 1 year.<h4>Methods</h4>In the Zwolle Infarction Study infarct size estimated as LDHQ was calculated in 1224  ...[more]

Similar Datasets

2015-09-15 | PXD002454 | Pride
2021-09-10 | PXD023819 | Pride
2011-01-03 | E-GEOD-15323 | biostudies-arrayexpress
2021-04-08 | PXD020292 | Pride
2022-12-12 | PXD038582 | Pride
2021-06-14 | PXD025782 | Pride
2020-03-11 | PXD017682 | Pride
2018-10-19 | E-MTAB-6180 | biostudies-arrayexpress
2018-02-19 | PXD004471 | Pride
2022-05-19 | PXD017849 | Pride