Proteomics,Multiomics

Dataset Information

0

Proteomics of Tomato Trichome Metabolism


ABSTRACT: Glandular trichomes (GT) are specialized cell factories that have the capacity to produce large amounts of metabolites which can amount to over 10% of the leaf dry weight. The specific expression of secondary metabolite pathways in glandular trichomes has facilitated their elucidation. However, little is known about the connection between central carbon and specialized metabolism in these cells. To address this question, we used the type VI glandular trichomes from a cultivated (Solanum lycopersicum LA4024) and a wild tomato accession (Solanum habrochaites LA1777) as a model. Our study is based on metabolomics, transcriptomics, proteomics and 13C-labeling datasets of trichome and leaves samples. This comparative analysis allowed us to identify specific features of trichomes in comparison to leaves. Tomato type VI trichomes are photosynthetic but acquire their carbon essentially from the leaves in the form of sucrose. Relatively high expression levels of photosystem genes and comparatively low expression of Calvin-cycle and photorespiration genes indicate that photosynthesis is used primarily to produce energy and reducing power to drive the high metabolic activity. High levels of polyunsaturated fatty acids, oxylipins, and of oxidized glutathione and high transcript and protein levels of associated enzymes further indicate a distinct capacity of GT to cope with oxidative stress. Enzymes which are involved in the supply of key precursors for the production of terpenoids both from the cytosol and in the chloroplasts are markedly increased. Finally, some enzymes that are typically associated with C4-photosynthesis are highly expressed in trichomes, suggesting that CO2 recycling processes may increase the efficiency of C usage in these cells. Based on this information we propose a model on how the glandular trichomes achieve high metabolic efficiency.

OTHER RELATED OMICS DATASETS IN: MTBLS297MTBLS64

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Solanum Lycopersicum

TISSUE(S): Plant Cell, Leaf, Trichome

DISEASE(S): Disease Free

SUBMITTER: Wolfgang Hoehenwarter  

LAB HEAD: Wolfgang Hoehenwarter

PROVIDER: PXD003154 | Pride | 2017-07-04

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
BG230913_1_LA1777T_9h_1.raw Raw
BG230913_1_LA1777T_9h_1_8109.mgf Mgf
BG230913_1_LA1777T_9h_1_8109.pride.mgf.gz Mgf
BG230913_1_LA1777T_9h_1_8109.pride.mztab.gz Mztab
BG230913_1_LA1777T_9h_1_8109.xml.gz Xml
Items per page:
1 - 5 of 164
altmetric image

Publications

Multi-Omics of Tomato Glandular Trichomes Reveals Distinct Features of Central Carbon Metabolism Supporting High Productivity of Specialized Metabolites.

Balcke Gerd U GU   Bennewitz Stefan S   Bergau Nick N   Athmer Benedikt B   Henning Anja A   Majovsky Petra P   Jiménez-Gómez José M JM   Hoehenwarter Wolfgang W   Tissier Alain A  

The Plant cell 20170413 5


Glandular trichomes are metabolic cell factories with the capacity to produce large quantities of secondary metabolites. Little is known about the connection between central carbon metabolism and metabolic productivity for secondary metabolites in glandular trichomes. To address this gap in our knowledge, we performed comparative metabolomics, transcriptomics, proteomics, and <sup>13</sup>C-labeling of type VI glandular trichomes and leaves from a cultivated (<i>Solanum lycopersicum</i> LA4024)  ...[more]

Similar Datasets

2017-05-31 | E-MTAB-4482 | biostudies-arrayexpress
2017-04-25 | MTBLS297 | MetaboLights
2021-07-27 | GSE118065 | GEO
2012-08-29 | E-GEOD-22236 | biostudies-arrayexpress
2016-04-25 | PXD003575 | Pride
2016-04-25 | PXD003602 | Pride
2016-04-25 | PXD003601 | Pride
2016-04-25 | PXD003600 | Pride
2021-07-26 | GSE117766 | GEO
2009-06-05 | GSE16431 | GEO