Proteomics

Dataset Information

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Deep mapping of the mouse podocyte proteome


ABSTRACT: We analyzed the proteome of mouse FACS-sorted podocytes. We compared podocytes ("green cells") with non-podocyte ("red cells") cells of the glomerulus.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Primary Cell, Epithelial Cell

SUBMITTER: Markus Rinschen  

LAB HEAD: Thomas Benzing

PROVIDER: PXD003306 | Pride | 2018-06-21

REPOSITORIES: Pride

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Publications


Damage to and loss of glomerular podocytes has been identified as the culprit lesion in progressive kidney diseases. Here, we combine mass spectrometry-based proteomics with mRNA sequencing, bioinformatics, and hypothesis-driven studies to provide a comprehensive and quantitative map of mammalian podocytes that identifies unanticipated signaling pathways. Comparison of the in vivo datasets with proteomics data from podocyte cell cultures showed a limited value of available cell culture models. M  ...[more]

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