Dataset Information

Characterization of the tomato fruit pericarp proteome

ABSTRACT: In this work, we present an extended characterization of the proteome of the tomato pericarp in its ripe red stage. An extensive fractionation of peptides through high pH reverse phase was performed associated to LC-MS/MS analysis on a Sciex Triple-TOF 6600.

INSTRUMENT(S): TripleTOF 6600

ORGANISM(S): Solanum Lycopersicum

TISSUE(S): Pericarp

SUBMITTER: Bertrand Fabre

LAB HEAD: Kathryn S. Lilley

PROVIDER: PXD004932 | Pride | 2016-12-22

REPOSITORIES: Pride

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Dataset's files

Source:

			Action	DRS
	09032016_Tomato_MP_F1.wiff	Wiff
	09032016_Tomato_MP_F1.wiff.1.idx2	Wiff
	09032016_Tomato_MP_F1.wiff.scan	Wiff
	09032016_Tomato_MP_F10.wiff	Wiff
	09032016_Tomato_MP_F10.wiff.1.idx2	Wiff

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In-depth characterization of the tomato fruit pericarp proteome.

Mata Clara I CI Fabre Bertrand B Hertog Maarten L A T M ML Parsons Harriet T HT Deery Michael J MJ Lilley Kathryn S KS Nicolaï Bart M BM

Proteomics 20170101 1-2

Since the genome of Solanum lycopersicum L. was published in 2012, some studies have explored its proteome although with a limited depth. In this work, we present an extended characterization of the proteome of the tomato pericarp at its ripe red stage. Fractionation of tryptic peptides generated from pericarp proteins by off-line high-pH reverse-phase phase chromatography in combination with LC-MS/MS analysis on a Fisher Scientific Q Exactive and a Sciex Triple-TOF 6600 resulted in the identifi ...[more]

PMID: 27957804

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