Proteomics

Dataset Information

0

C. rodentium remodels metabolism in IEC

ABSTRACT: The mechanisms by which the mouse pathogen Citrobacter rodentium triggers effacement of the brush border microvilli, colitis, hyperplasia and dysbiosis remain poorly understood. We investigated the impact of C. rodentium infection on the proteomic and metabolic landscapes of intestinal epithelial cells (IECs) in vivo using isobaric labeling proteomics and targeted metabolomics. We found that infection depletes proteins involved in butyrate uptake, glycolysis, TCA cycle, lipid metabolism and oxidative phosphorylation with aparallel, increased production of creatine/phosphocreatine and cholesterol. The evolving ecological niche within the infected gut was concomitant with a reduction in butyrate-producing commensal bacteria and expansion of Proteobacteria that can metabolize cholesterol. These changes coincide with the modulation of IEC transcription factors by C. rodentium, specifically phosphorylation of Kdm5a, demethylation of histone H3 (Lys-4) and cleavage of Srebp2. Taken together our results show that whilst engaging with the host in a race to control innate immune responses, C. rodentium and the changing microbiota shape the metabolism flow in IECs.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Citrobacter Rodentium Mus Musculus (mouse)

TISSUE(S): Epithelial Cell, Colon

DISEASE(S): Colitis

SUBMITTER: James Wright  

LAB HEAD: Jyoti Choudhary

PROVIDER: PXD005004 | Pride | 2018-01-10

REPOSITORIES: Pride

Json Xml

Dataset's files

Source:
Action DRS
06DEC16_enterocytes_10plex_IMAC.msf Msf
12FEB15_Enterocytes_10plex_16.raw Raw
12FEB15_Enterocytes_10plex_17.raw Raw
12FEB15_Enterocytes_10plex_18.raw Raw
12FEB15_Enterocytes_10plex_19.raw Raw
Items per page:
1 - 5 of 61
altmetric image

Publications

The intestinal epithelial cells (IECs) that line the gut form a robust line of defense against ingested pathogens. We investigated the impact of infection with the enteric pathogen Citrobacter rodentium on mouse IEC metabolism using global proteomic and targeted metabolomics and lipidomics. The major signatures of the infection were upregulation of the sugar transporter Sglt4, aerobic glycolysis, and production of phosphocreatine, which mobilizes cytosolic energy. In contrast, biogenesis of mito  ...[more]

Similar Datasets

Proteomics Intestinal crypt cells and the microbiome undergo abrupt reprogramming at the onset of colonic infection
2019-03-05 | PXD012031 | Pride
Proteomics Citrobacter rodentium triggers exaggerated mucosal responses in mice developing severe intestinal disease
2020-01-21 | PXD012846 | Pride
Proteomics Deconstructing a type III secretion system effector network unravels the inherent robustness and plasticity in pathogenesis and immunity
2022-04-04 | PXD023145 | Pride
Proteomics Intestinal epithelial cells display molecular memory weeks post bacterial infection clearance
2022-01-05 | PXD022230 | Pride
Proteomics Deconstructing a type III secretion system effector network unravels the inherent robustness and plasticity in pathogenesis and immunity
2022-04-06 | PXD018740 | Pride
Proteomics Citrobacter rodentium ICC168 CPX SILAC
2019-01-07 | PXD009049 | Pride
Transcriptomics H3K4me3 occupancy after Rnf20 and Rnf40 knockout in intestinal epithelial cells isolated from mice
2021-06-16 | E-MTAB-9409 | biostudies-arrayexpress
Transcriptomics mRNA-seq of intestinal epithelial cells isolated from Rnf20 and Rnf40 knockout mice
2021-06-16 | E-MTAB-9405 | biostudies-arrayexpress
Proteomics Clustering of Tir during E. coli infection affects Ca2+-dependent LPS internalisation leading to activation of pyroptosis in intestinal epithelial cells
2020-10-28 | PXD018763 | Pride
Transcriptomics Histone butyrylation in the mouse intestine is mediated by the microbiota and associated with regulation of gene expression
2024-01-13 | GSE216319 | GEO