Proteomics

Dataset Information

0

Fractions of cat serum, LC-MS/MS


ABSTRACT: Today immunoassays are widely used in veterinary medicine, but lack of species specific assays often necessitates the use of assays developed for human applications. Mass spectrometry (MS) is an attractive alternative due to high specificity and versatility, allowing for species-independent analysis. Targeted MS-based quantification methods are valuable complements to large scale shotgun analysis. A method referred to as parallel reaction monitoring (PRM), implemented on Orbitrap MS, has lately been presented as an excellent alternative to more traditional selected reaction monitoring/multiple reaction monitoring (SRM/MRM) methods. The insulin-like growth factor (IGF)-system is not well described in the cat but there are indications of important differences between cats and humans. In feline medicine IGF–I is mainly analyzed for diagnosis of growth hormone disorders but also for research, while the other proteins in the IGF-system are not routinely analyzed within clinical practice. Here, a PRM method for quantification of IGF–I, IGF–II, IGF binding protein (BP) –3 and IGFBP–5 in feline serum is presented. Selective quantification was supported by the use of a newly launched internal standard named QPrEST™. Homology searches demonstrated the possibility to use this standard of human origin for quantification of the targeted feline proteins. Excellent quantitative sensitivity at the attomol/µL (pM) level and selectivity were obtained. As the presented approach is very generic we show that high resolution mass spectrometry in combination with PRM and QPrEST™ internal standards is a versatile tool for protein quantitation across multispecies.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Felis Catus (cat) (felis Silvestris Catus)

TISSUE(S): Blood Serum

SUBMITTER: Margareta Ramstrom  

LAB HEAD: Margareta Ramstrom

PROVIDER: PXD005337 | Pride | 2017-01-04

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Uppsala_Cat_Fraction_I.msf Msf
Uppsala_Cat_Fraction_I.raw Raw
Uppsala_Cat_Fraction_II.msf Msf
Uppsala_Cat_Fraction_II.raw Raw
Uppsala_Cat_Fraction_III.msf Msf
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Publications

Quantitative and Selective Analysis of Feline Growth Related Proteins Using Parallel Reaction Monitoring High Resolution Mass Spectrometry.

Sundberg Mårten M   Strage Emma M EM   Bergquist Jonas J   Holst Bodil S BS   Ramström Margareta M  

PloS one 20161201 12


Today immunoassays are widely used in veterinary medicine, but lack of species specific assays often necessitates the use of assays developed for human applications. Mass spectrometry (MS) is an attractive alternative due to high specificity and versatility, allowing for species-independent analysis. Targeted MS-based quantification methods are valuable complements to large scale shotgun analysis. A method referred to as parallel reaction monitoring (PRM), implemented on Orbitrap MS, has lately  ...[more]

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