Proteomics

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Concerted regulation of ISWI by an autoinhibitory domain and the H4 N-terminal tail


ABSTRACT: ISWI-family nucleosome remodeling enzymes need the histone H4 N-terminal tail to mobilize nucleosomes. Here we mapped the H4-tail binding pocket of ISWI. Surprisingly the binding site was adjacent to but not overlapping with the docking site of an auto-regulatory motif, AutoN, in the N-terminal region (NTR) of ISWI, indicating that AutoN does not act as a simple pseudosubstrate as suggested previously. Rather, AutoN cooperated with a hitherto uncharacterized motif, termed AcidicN, to confer H4-tail sensitivity and discriminate between DNA and nucleosomes. A third motif in the NTR, ppHSA, was functionally required in vivo and provided structural stability by clamping the NTR to Lobe 2 of the ATPase domain. This configuration is reminiscent of Chd1 even though Chd1 contains an unrelated NTR. Our results shed light on the intricate structural and functional regulation of ISWI by the NTR and uncover surprising parallels with Chd1. Elife. 2017 Jan 21;6. pii: e21477. doi: 10.7554/eLife.21477. [Epub ahead of print]

INSTRUMENT(S): LTQ Orbitrap XL, Q Exactive

ORGANISM(S): Homo Sapiens (human) Drosophila Melanogaster (fruit Fly)

SUBMITTER: Johanna Ludwigsen  

LAB HEAD: Felix Mueller-Planitz

PROVIDER: PXD005831 | Pride | 2017-02-02

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
10H483Bfl_4mclv.xlsm Xls
10dataset1_X-linkedpeptides_negativectrl.txt Txt
10dataset2_X-linkedpeptides.txt Txt
12H483Bfl_4mclv.xlsm Xls
12dataset1_X-linkedpeptides_negativectrl.txt Txt
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Publications

Concerted regulation of ISWI by an autoinhibitory domain and the H4 N-terminal tail.

Ludwigsen Johanna J   Pfennig Sabrina S   Singh Ashish K AK   Schindler Christina C   Harrer Nadine N   Forné Ignasi I   Zacharias Martin M   Mueller-Planitz Felix F  

eLife 20170121


ISWI-family nucleosome remodeling enzymes need the histone H4 N-terminal tail to mobilize nucleosomes. Here we mapped the H4-tail binding pocket of ISWI. Surprisingly the binding site was adjacent to but not overlapping with the docking site of an auto-regulatory motif, AutoN, in the N-terminal region (NTR) of ISWI, indicating that AutoN does not act as a simple pseudosubstrate as suggested previously. Rather, AutoN cooperated with a hitherto uncharacterized motif, termed AcidicN, to confer H4-t  ...[more]

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