Proteomics

Dataset Information

0

UBE2O remodels the proteome during terminal erythroid differentiation


ABSTRACT: Terminal differentiation is characterized by a respecification of the global protein complement, as epitomized by erythrocytes, whose cytosol is ~98% globin. Remodeling of the proteome involves programmed elimination of generic cellular constituents in parallel with synthesis of cell-type-specific proteins. The erythroid proteome undergoes a rapid transition at the reticulocyte stage; however, the mechanisms driving elimination of preexisting cytosolic proteins are unidentified. UBE2O is a ubiquitin-conjugating enzyme expressed at elevated levels during late stage erythropoiesis. A Ube2o null mutation in mice results in anemia. Proteomic analysis of this mutant suggests that UBE2O is a broad-spectrum ubiquitinating enzyme that remodels the erythroid proteome. In particular, a hallmark of the reticulocyte to mature erythrocyte transition—ribosome elimination—is defective in Ube2o-/- mutants. UBE2O recognizes ribosomal proteins and other substrates directly, targeting them to proteasomes for degradation. Thus, in reticulocytes, and perhaps other highly differentiated cells, the induction of ubiquitinating factors may drive the transition from a complex to a simple proteome.

INSTRUMENT(S): Orbitrap Fusion Lumos, Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human) Mus Musculus (mouse)

TISSUE(S): Blood Cell, Permanent Cell Line Cell, Cell Culture, Reticulocyte

DISEASE(S): Anemia,Hypochromic Anemia

SUBMITTER: Miguel Prado  

LAB HEAD: Daniel J Finley

PROVIDER: PXD005904 | Pride | 2017-08-08

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
GFY_220817_out.tgz Other
GFY_220818_out.tgz Other
GFY_220819_out.tgz Other
GFY_220820_out.tgz Other
GFY_220821_out.tgz Other
Items per page:
1 - 5 of 39
altmetric image

Publications


During terminal differentiation, the global protein complement is remodeled, as epitomized by erythrocytes, whose cytosol is ~98% globin. The erythroid proteome undergoes a rapid transition at the reticulocyte stage; however, the mechanisms driving programmed elimination of preexisting cytosolic proteins are unclear. We found that a mutation in the murine <i>Ube2o</i> gene, which encodes a ubiquitin-conjugating enzyme induced during erythropoiesis, results in anemia. Proteomic analysis suggested  ...[more]

Similar Datasets

2018-10-26 | PXD005048 | Pride
2016-03-31 | PXD003276 | Pride
2020-02-20 | PXD014353 | Pride
2011-03-23 | E-GEOD-28131 | biostudies-arrayexpress
2009-04-29 | E-GEOD-5073 | biostudies-arrayexpress
| PRJNA90493 | ENA
2015-05-26 | E-GEOD-69169 | biostudies-arrayexpress
| PRJNA115061 | ENA
2018-08-03 | PXD009023 | Pride
2018-07-16 | PXD008945 | Pride