Proteomics

Dataset Information

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Allergen detection in commercial foods


ABSTRACT: The frequent use of precautionary food allergen labeling statements such as “may contain” poses challenges to allergic individuals relying on such labeling to determine whether a food is safe to consume. To survey the frequency at which these precautionary statements indicate allergen contamination in commercial foods we developed a multiplexed liquid chromatography-mass spectrometry assay targeting 14 common allergens. For each allergen, we selected two or more tryptic peptides belonging to two or more clinically-recognized allergenic proteins by following one of two approaches. For certain allergenic proteins, a wealth of existing mass spectrometry literature suggests ideal tryptic peptide targets. In these cases, such for milk proteins Bos d 5 and Bos d 9, as well as peanut protein Ara h 3, we chose peptides using the Allergen Peptide Browser (APB), a freely available online database we developed. To choose peptides for the remaining allergenic proteins, as well as validate our choices, we applied shotgun proteomics to pure allergen protein extracts of the aforementioned allergens.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Carya Illinoinensis Sesamum Indicum Corylus Avellana Avena Sativa Juglans Bertholletia Excelsa Secale Cereale Lupinus Angustifolius Fagopyrum Esculentum Sinapis Alba Anacardium Occidentale Triticum Aestivum (wheat) Glycine Max Arachis Hypogaea (peanut) Bos Taurus (bovine) Gallus Gallus (chicken) Hordeum Vulgare (barley) Apium Graveolens Prunus Dulcis Pistacia Vera

SUBMITTER: Derek Croote  

LAB HEAD: Stephen Quake

PROVIDER: PXD007688 | Pride | 2019-07-17

REPOSITORIES: Pride

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Publications

Addressing Complex Matrix Interference Improves Multiplex Food Allergen Detection by Targeted LC-MS/MS.

Croote Derek D   Braslavsky Ido I   Quake Stephen R SR  

Analytical chemistry 20190724 15


The frequent use of precautionary food allergen labeling (PAL) such as "may contain" frustrates allergic individuals who rely on such labeling to determine whether a food is safe to consume. One technique to study whether foods contain allergens is targeted liquid chromatography-tandem mass spectrometry (LC-MS/MS) employing scheduled multiple reaction monitoring (MRM). However, the applicability of a single MRM method to many commercial foods is unknown as complex and heterogeneous interferences  ...[more]

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