Proteomics

Dataset Information

0

SMARCA4 Phosphorilation inhibition


ABSTRACT: Cyclin-Dependent Kinase 9 (CDK9) as part of the PTEFb complex promotes transcriptional elongation and high-level gene expression. We now report that, paradoxically, CDK9 is also essential for maintaining gene silencing at heterochromatic loci. Through a live cell screen, we discovered that CDK9 inhibition reactivates epigenetically silenced genes in cancer, leading to restored tumor suppressor gene expression and cell differentiation, along with activation of endogenous retrovirus (ERV) genes. CDK9 inhibition maintains gene silencing directly through phosphorylation of the SWI/SNF protein SMARCA4 and indirectly through HP1α activation. Based on gene activation, we developed the highly selective and 2 potent CDK9 inhibitor MC180295 (IC50 =5.1nM) that has broad anti-cancer activity in-vitro and is effective in in-vivo cancer models. Additionally, CDK9 inhibition synergizes with the immune checkpoint inhibitor α-PD-1 in vivo, making it an excellent target for epigenetic therapy of cancer.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture, Colon

DISEASE(S): Colon Cancer

SUBMITTER: Carlos Barrero  

LAB HEAD: Salim Merali

PROVIDER: PXD008040 | Pride | 2023-06-13

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
CDK9_Phospho_295_500nM_4hr_SCX2.raw Raw
CDK9_Phospho_295_500nM_4hr_SCX4.raw Raw
CDK9_Phospho_295_500nM_4hr_buffer_X.raw Raw
CDK9_Phospho_DMSO_1.mzML Mzml
CDK9_Phospho_DMSO_4hr_SCX2_051017.raw Raw
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Publications


Cyclin-dependent kinase 9 (CDK9) promotes transcriptional elongation through RNAPII pause release. We now report that CDK9 is also essential for maintaining gene silencing at heterochromatic loci. Through a live cell drug screen with genetic confirmation, we discovered that CDK9 inhibition reactivates epigenetically silenced genes in cancer, leading to restored tumor suppressor gene expression, cell differentiation, and activation of endogenous retrovirus genes. CDK9 inhibition dephosphorylates  ...[more]

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