Proteomics

Dataset Information

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Malaria Hepatocyte HC-04.J7 Project


ABSTRACT: Characterization of three hepatocyte cell lines (2 parental and 1 clone), under two different media conditions. Parental cell lines HepG2 and HC-04, single cell cloned from HC-04 defined as HC-04.J7. The goal of the project initially was to investigate the invasion of hepatocytes by Plasmodium falciparum sporozoites, and once found that the HC-04 cell had a higher invasion than HepG2, single cell isolates were generated from HC-04 before being expanded. The resulting HC-04.J7 isolate further improved the invasion rate. Transcriptomic and proteomic data sets were generated from all cell lines in both media, than analyzed for potential receptors or biochemical pathways that play a role in the increased invasion of HC-04 and specifically, HC-04.J7.

INSTRUMENT(S): 6220 Time-of-Flight LC/MS

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Timothy Hamerly  

LAB HEAD: Rhoel David Ramos Dinglasan

PROVIDER: PXD008613 | Pride | 2019-11-12

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F001743.dat Other
F001744.dat Other
F001745.dat Other
F001746.dat Other
F001747.dat Other
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Publications

The Selection of a Hepatocyte Cell Line Susceptible to <i>Plasmodium falciparum</i> Sporozoite Invasion That Is Associated With Expression of Glypican-3.

Tweedell Rebecca E RE   Tao Dingyin D   Hamerly Timothy T   Robinson Tanisha M TM   Larsen Simon S   Grønning Alexander G B AGB   Norris Alessandra M AM   King Jonas G JG   Law Henry Chun Hin HCH   Baumbach Jan J   Bergmann-Leitner Elke S ES   Dinglasan Rhoel R RR  

Frontiers in microbiology 20190228


<i>In vitro</i> studies of liver stage (LS) development of the human malaria parasite <i>Plasmodium falciparum</i> are technically challenging; therefore, fundamental questions about hepatocyte receptors for invasion that can be targeted to prevent infection remain unanswered. To identify novel receptors and to further understand human hepatocyte susceptibility to <i>P. falciparum</i> sporozoite invasion, we created an optimized <i>in vitro</i> system by mimicking <i>in vivo</i> liver conditions  ...[more]

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