Proteomics

Dataset Information

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CASP XL-MS target H0957 (ID31): Cross-linking for the 13th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction (CASP13)

ABSTRACT: Chemical cross-linking coupled to mass spectrometry was used to provide distance restraints for different homo- and heterooligomeric complexes as part of the CASP13 experiment (https://www.predictioncenter.org/casp13/index.cgi).

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Escherichia Coli

SUBMITTER: Alexander Leitner  

LAB HEAD: Alexander Leitner

PROVIDER: PXD010003 | Pride | 2019-10-02

REPOSITORIES: Pride

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Dataset's files

Source:
Action DRS
CASP_ID31_209.fasta Fasta
File_list_ID31.xlsx Xlsx
ReportXL_CASP13_target31.docx Other
ejensen_C1804_069.raw Raw
ejensen_C1804_070.raw Raw
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Publications

With the advance of experimental procedures obtaining chemical crosslinking information is becoming a fast and routine practice. Information on crosslinks can greatly enhance the accuracy of protein structure modeling. Here, we review the current state of the art in modeling protein structures with the assistance of experimentally determined chemical crosslinks within the framework of the 13th meeting of Critical Assessment of Structure Prediction approaches. This largest-to-date blind assessmen  ...[more]

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