Proteomics

Dataset Information

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Heparin-binding proteome in normal pancreas and murine experimental pancreatitis_C4PR_LIV


ABSTRACT: Acute pancreatitis (AP) is acute inflammation of the pancreas, mainly caused by gallstones and alcohol, driven by changes in communication between cells. Heparin-binding proteins (HBPs) play a central role in cell communication. Therefore, we used heparin affinity proteomics to identify extracellular HBPs in pancreas and plasma of normal mice and in a caerulein mouse model of AP. Many new extracellular HBPs (360) were discovered in the pancreas, taking the total number of HBPs known to 786. Extracellular pancreas HBPs form highly interconnected protein-protein interaction networks in both normal pancreas (NP) and AP. Thus, HBPs represent an important set of extracellular proteins with significant regulatory potential in the pancreas. HBPs in NP are associated with biological functions such as molecular transport and cellular movement that underlie pancreatic homeostasis. However, in AP HBPs are associated with additional processes such as acute phase response signalling, complement activation and mitochondrial dysfunction. Plasma HBPs in AP included known AP biomarkers such as serum amyloid A, as well as emerging targets such as histone H2A. Pancreas HBPs are extracellular and so easily accessible and are potential drug targets in AP, whereas plasma HBPs represent potential biomarkers for AP.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Blood Cell, Blood Plasma

DISEASE(S): Acute Pancreatitis

SUBMITTER: Deborah Simpson  

LAB HEAD: Professor David G Fernig

PROVIDER: PXD012039 | Pride | 2018-12-17

REPOSITORIES: Pride

Dataset's files

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Action DRS
AP2_2h_1uL.mgf Mgf
AP2_2h_1uL.mzid.gz Mzid
AP2_2h_1uL.pride.mgf.gz Mgf
AP2_2h_1uL.pride.mztab.gz Mztab
AP2_2h_1uL.raw Raw
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Publications


Acute pancreatitis (AP) is acute inflammation of the pancreas, mainly caused by gallstones and alcohol, driven by changes in communication between cells. Heparin-binding proteins (HBPs) play a central role in health and diseases. Therefore, we used heparin affinity proteomics to identify extracellular HBPs in pancreas and plasma of normal mice and in a caerulein mouse model of AP. Many new extracellular HBPs (360) were discovered in the pancreas, taking the total number of HBPs known to 786. Ext  ...[more]

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