Proteomics

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Conserved GTPase LepA (Elongation Factor 4) functions in biogenesis of the 30S subunit of the 70S ribosome


ABSTRACT: The physiological role of LepA, a paralog of EF-G found in all bacteria, has been a mystery for decades. Here, we show that LepA functions in ribosome biogenesis. In cells lacking LepA, immature 30S particles accumulate. Four proteins are specifically underrepresented in these particles-S3, S10, S14, and S21-all of which bind late in the assembly process and contribute to the folding of the 3' domain of 16S rRNA. Processing of 16S rRNA is also delayed in the mutant strain, as indicated by increased levels of precursor 17S rRNA in assembly intermediates. Mutation ΔlepA confers a synthetic growth phenotype in absence of RsgA, another GTPase, well known to act in 30S subunit assembly. Analysis of the ΔrsgA strain reveals accumulation of intermediates that resemble those seen in the absence of LepA. These data suggest that RsgA and LepA play partially redundant roles to ensure efficient 30S assembly. This data is published in paper PMID: 28096346

INSTRUMENT(S): Bruker Daltonics instrument model

ORGANISM(S): Escherichia Coli

SUBMITTER: Jenny Moon  

LAB HEAD: Leonard J. Foster

PROVIDER: PXD014436 | Pride | 2019-07-03

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
MaxQuant_1.5.1.0.zip Other
lepA_2plex-1.zip Other
lepA_2plex-2.zip Other
lepA_2plex1txt.zip Other
lepA_2plex2txt.zip Other
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Publications

Conserved GTPase LepA (Elongation Factor 4) functions in biogenesis of the 30S subunit of the 70S ribosome.

Gibbs Michelle R MR   Moon Kyung-Mee KM   Chen Menglin M   Balakrishnan Rohan R   Foster Leonard J LJ   Fredrick Kurt K  

Proceedings of the National Academy of Sciences of the United States of America 20170117 5


The physiological role of LepA, a paralog of EF-G found in all bacteria, has been a mystery for decades. Here, we show that LepA functions in ribosome biogenesis. In cells lacking LepA, immature 30S particles accumulate. Four proteins are specifically underrepresented in these particles-S3, S10, S14, and S21-all of which bind late in the assembly process and contribute to the folding of the 3' domain of 16S rRNA. Processing of 16S rRNA is also delayed in the mutant strain, as indicated by increa  ...[more]

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