Proteomics

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SBDS-dependent ribosome destabilization maintains pluripotency via regulation of translation


ABSTRACT: Unique traits of pluripotent stem cells are not fully known. Using thermal proteome profiling, we identified reduced stability of ribosomes in induced pluripotent cells (iPSCs) compared to that in somatic cells. Also, iPSCs exhibited lower protein synthesis rate and lower expression of a ribosome maturation factor, the Shwachman-Bodian-Diamond Syndrome protein (SBDS). Differentiation of iPSCs led to upregulation of SBDS and knock-down of SBDS slowed the differentiation while increasing expression of master pluripotency markers NANOG and OCT4. Mutations in the SBDS gene have been shown to impair ribosome assembly and to inhibit differentiation of hematopoietic stem cells causing the Shwachman-Diamond syndrome. Physiological SBDS-dependent destabilization of ribosomes appears to be a tool for translational control providing robustness to the state of pluripotency.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture, Fibroblast, Embryonic Stem Cell

SUBMITTER: Pierre Sabatier  

LAB HEAD: Roman A. Zubarev

PROVIDER: PXD015874 | Pride | 2021-10-05

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20190917_ESC_EB_hFF_980_1.raw Raw
20190917_ESC_EB_hFF_980_10.raw Raw
20190917_ESC_EB_hFF_980_11.raw Raw
20190917_ESC_EB_hFF_980_12.raw Raw
20190917_ESC_EB_hFF_980_13.raw Raw
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